|
Name : Pecwa_0639 (Pecwa_0639) Accession : YP_003258070.1 Strain : Pectobacterium wasabiae WPP163 Genome accession: NC_013421 Putative virulence/resistance : Unknown Product : integrase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 679339 - 680463 bp Length : 1125 bp Strand : + Note : PFAM: integrase; KEGG: eca:ECA0546 shufflon-specific DNA recombinase DNA sequence : ATGAAAAAACGTATAAAAAAGATGCTATTAAGCCAGGCGCTGGACAAATATTTCGCTACTGTCTCACGCTATAAACGGGG GCAGTTGCAAGAATTTTATCGAATAAACGTTATCAAAAGATCACCGCTTGCTAACCGACATATGGATGAAATTTCATCAG TTGATATTGCTGGATATCGAGATGACAGACTGGCCCAGATTAATCCACGTACAAAAAAATCTATCAGTGGCAACACTGTT CGTCTTGAGCTTGCGTTGCTCTCCGCATTGTATAATTTGGCCAAAGTCGAATGGGGAACATGCACGAGTAATCCAGTTGA ACACGTTAGAAAGCCTGCGGTGTCTTCAGGTCGGGTGCGTAGGTTAACGTCACAAGAAGAACGAGGTCTGACCCGTTACT TCAGAGGTAAAAAACCTGAGTTATTAGCTATCTTCCGTTTAGCCATTGAAACAGCGATGAGGCAAGGTGAAATACTGTCA TTACGATGGGAGAATATCGATCTTCGACTCGGGATTGCTCACCTGCCGTTAACAAAAAATGGCTCTGCTCGTGATGTGCC ATTGTCTTCAAAGGCGCGTCTGGTTTTGAAGGAAATTGGCGAACTGGGGCGTGATGATACGGGGAATGTTTTTACATATA CGTCGAGTGGCTTTAAAAGTGCCTGGCGTATCGCATTGCAGTCTCTATCGATTAATGATCTGCATTTTCATGATTTGAGG CATGAAGCGATTAGCCGGCTGTTTGAATTGGGGACATTAAACGTCATGGAGGTCGCTGCGATATCGGGGCATAAGTCCAT GAATATGCTAAAAAGGTATACGCATCTCAGGGCTACTCACCTGGTCAGTAAATTGGATGCTCGCAAAAAGCAGGCACAAA AACTGACCTCAATATTTATTCCTTACCCCGCAGACATTTACACTTATGATGGTACGATCACCCTGAAGTTTTCTGATTTT GATGACCTTGAAGTGACTGCTGCAACTCACGATGAGGCATTACGGAACGCATCGGTAGAGCTGTTACGGTTCCAAGCTAT AGCAGCTAAAAATGGCGAAAGGCTCCCCCCTCCTGGTCCTGTATCTGTGAATTCAGTTAATAGGCTTCTCATCAGTCCCT TGTAA Protein sequence : MKKRIKKMLLSQALDKYFATVSRYKRGQLQEFYRINVIKRSPLANRHMDEISSVDIAGYRDDRLAQINPRTKKSISGNTV RLELALLSALYNLAKVEWGTCTSNPVEHVRKPAVSSGRVRRLTSQEERGLTRYFRGKKPELLAIFRLAIETAMRQGEILS LRWENIDLRLGIAHLPLTKNGSARDVPLSSKARLVLKEIGELGRDDTGNVFTYTSSGFKSAWRIALQSLSINDLHFHDLR HEAISRLFELGTLNVMEVAAISGHKSMNMLKRYTHLRATHLVSKLDARKKQAQKLTSIFIPYPADIYTYDGTITLKFSDF DDLEVTAATHDEALRNASVELLRFQAIAAKNGERLPPPGPVSVNSVNRLLISPL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rci | NP_458640.1 | shufflon-specific DNA recombinase | Not tested | SPI-7 | Protein | 1e-106 | 67 |
| rci | NP_807850.1 | shufflon-specific DNA recombinase | Not tested | SPI-7 | Protein | 1e-106 | 67 |
| rci | AAC38070.2 | Rci | Not tested | SPI-7 | Protein | 1e-106 | 67 |
| unnamed | ABR13530.1 | site-specific recombinase | Not tested | PAGI-8 | Protein | 1e-33 | 42 |
