Gene Information

Name : Pecwa_0620 (Pecwa_0620)
Accession : YP_003258051.1
Strain : Pectobacterium wasabiae WPP163
Genome accession: NC_013421
Putative virulence/resistance : Virulence
Product : single-stranded DNA-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 663111 - 663659 bp
Length : 549 bp
Strand : +
Note : binds to single stranded DNA and PriA helcase facilitate replication restart

DNA sequence : 
ATGGCTTCACGTGGCGTAAATAAAGTAACACTTATCGGATTTTTGGGGCAGGATCCCGAAGTTCGTTATATGCCAAATGG
TAACGCAGTTACTGGTATTACTATGGCAACGTCAGAAACCTGGCGCGATAAACAAACTGGCGAAGAGAAAGAGCGTACTG
AATGGCACCGTGTGGTGATATTTGGCAAGCTTGCAGAAATTGCCGGAGAGTATTTGCGTAAAGGATCTCAAGTTTACATT
GAAGGGCAACTTCAAACACGTAAGTGGCAAGATAGCGCGGGTGTAGATCGTTGGACGACCGAAATTGTAGTCAGCCAGCG
TGGCACGATGCAGATGTTAGGATCTCGCCCGAACGACGGAAATAACAACCAAAGTGCGGCCAACACTTCATGGGGAAAAC
CTCAGCAGCCAGCAGCACCGGCACACAGTGGTACCCCTCAGTCTCAACGTCCAGCTGGCAATGAACCGCCGATGGATTTT
GACGACGACATACCGTTTCTGGGGTTTGGCTATGGCGTATGTCGTAAAGCGATTTATGCCGTATCTTAA

Protein sequence : 
MASRGVNKVTLIGFLGQDPEVRYMPNGNAVTGITMATSETWRDKQTGEEKERTEWHRVVIFGKLAEIAGEYLRKGSQVYI
EGQLQTRKWQDSAGVDRWTTEIVVSQRGTMQMLGSRPNDGNNNQSAANTSWGKPQQPAAPAHSGTPQSQRPAGNEPPMDF
DDDIPFLGFGYGVCRKAIYAVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssB NP_458627.1 single strand binding protein Not tested SPI-7 Protein 3e-54 69
ssb NP_807839.1 single-stranded DNA-binding protein Not tested SPI-7 Protein 3e-54 69
ssb AAF14810.1 single strand binding protein Not tested SPI-7 Protein 2e-54 69
ssb AAC26638.1 single-strand binding protein Not tested SPI-4 Protein 2e-34 54
ssb1 YP_005176252.1 single-stranded DNA-binding protein Not tested ICEPmu1 Protein 4e-31 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pecwa_0620 YP_003258051.1 single-stranded DNA-binding protein VFG0576 Protein 3e-42 62