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Name : Pecwa_0618 (Pecwa_0618) Accession : YP_003258049.1 Strain : Pectobacterium wasabiae WPP163 Genome accession: NC_013421 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0550 EC number : - Position : 659898 - 661907 bp Length : 2010 bp Strand : + Note : decatenates replicating daughter chromosomes DNA sequence : GTGCGCCTCTTTATCTGTGAAAAACCCTCTCAGGCCAGAGATATTGCTGCTGTTCTGGGAGCAACAAAGCGAGGACAAGG TTTCTTATCTGCTCCAGGAATAACCATAACCTGGGCCCGGGGGCACCTTTTAGAAACCGCCTCACCAGAAGTCTATGGCA CCCAGTTTGAGAAACCGTGGCGAATAGATGTGTTACCGGTTTTGCCCCCCGTATGGCAGATGGTTGTGAAGTCAGAATCG TCAGACCAGTTCACGGTCATCTCCCGATTGTTGAAGCAGGTTGATGAAGTCGTCATATCAACTGATGCTGATAGGGAAGG AGAAGTTATCGGATGGTCTCTGTTGGAATATTGCGGATGGAGAGGTCCCGTTTTTCGTTTGTGGCTGTCTGCATTGGATG AGTCCAGTATTCGTGCTGCATTAGCTGCTATTAAACCAGGTTCAGAAACAAAGCCGCTTTATTATGCAGGCCTGGGGCGT TCGCGAGCGGACTGGCTAATAGGTATGAACCTGACCCGGCTTTATACCGTGAAAGCGAGGGATAAGGGATATGACGGGCT TCTGTCTGTTGGGCGAGTGCAAACCCCTGTATTGGCGATGGTCGTTAATCGTGAGCGAGAAATAGCGACGTTCGTCCCTA AACCTTACTGGCAAGTATGGGTAGCACTACAGTCTAATGGTGTCCGTTTCTCTGCGCAGTGGGTTCCTGCGAAAATGTAT GTCGATGAAGAGAAACGCTGTATTCATCAGGACATCGCTCAGCAAGTTGCACAGCTTTGTAAACAAACAGGCAAGGCAAC GGTAATTGAGCAGGAAACAAAGCGAGAAAAAGAGGCTGCACCCTTGGCGTTCACCATGGGAACGCTACAGCAGGCCTGCG GCAGACTTTGGGACATGAGTCCTCAGAAAGTGCTGGACATAGCACAGAGCCTGTATGAGACGCATAAAGCAACGTCTTAC CCGCGAACCGATTGTGGGTTTCTTCCTGAGTCAATGCGTGAGGAAATTCCTGATGTCCTGAGTGCATTGGTGAAAATCGA CCCCTCACTACAGGCGTTGATTTCTCAGCTAGATACTCGTTTTGTTTCCCGCATATGGGATGACAAAAAAATGACTGCCC ACCACGGTATCATTCCGACACGGCATGTTTGTGACATGTCGAAGATGAGCGATCAGGAAAAGCAGGTTTACGTGTTAATC AGACGACATTATCTAGCCCAGTTTTTTCCTCTGCATGAAGTCGATTTCACGCGACTTTCCCTAAATATCGGAGGCCAACT GTTTCAGACAACGGGGCGGGTCGTTGTTGTTCCTGGGTGGAAACGTTTGTTTAGTCAGGATGACGGTGAACATAAAGAGG CTGCGGCAGATGAGAAAGACCAATCTTTACCTATGCTCGTAAAGGGAGATAACTGTGGCGTGGCTGGCTCTGAGGTAAAG GCACTGAAAACAAAGCCTCCCCAGTATTTTACATTCCAATCATTGATTGCGGCTATGATGAACGCTGCGGCGTATGTGAC CGATTTAACGCTGAAAAAAGTACTGAAAGAGAACGCAGGGTTAGGCACGGAAGCGACGCGTGGTGGGATTGTCGAAACGT TACTGGCGCGTAACTTCATCAGCATAAAAGGGCGTTACTTGCGTGCAACAGATATTGCGATGGATCTTATCGATGCTTTA CCTCACGCGTTAAAAGAGCCCGGTATGACGGCGCTTTGGGAACAGGCGCTCGATGAGGTTGCTAAAGGGAGAATGACGCT GGATAGCTTTATGTCCCGACAGACTCAGTGGATTTGTCAGTTGGTTTCCCTGGGAACTCAACAAGATGTTGTCGTTCGTG TTCCTCCTACGCCTGCTTGCCCTCTTTGTGGTAGTAAGACGCGGTTACGAAAAGGGGCAAAAGGAGCATTTTATGGTTGT GAAAAATATCCAGACTGTAAGGGCATGATAAATGTCCCTGGCCAGAGCAAGAATGCGGCATCTAAAACACGAAAGAAAAA GCAGAATTAA Protein sequence : MRLFICEKPSQARDIAAVLGATKRGQGFLSAPGITITWARGHLLETASPEVYGTQFEKPWRIDVLPVLPPVWQMVVKSES SDQFTVISRLLKQVDEVVISTDADREGEVIGWSLLEYCGWRGPVFRLWLSALDESSIRAALAAIKPGSETKPLYYAGLGR SRADWLIGMNLTRLYTVKARDKGYDGLLSVGRVQTPVLAMVVNREREIATFVPKPYWQVWVALQSNGVRFSAQWVPAKMY VDEEKRCIHQDIAQQVAQLCKQTGKATVIEQETKREKEAAPLAFTMGTLQQACGRLWDMSPQKVLDIAQSLYETHKATSY PRTDCGFLPESMREEIPDVLSALVKIDPSLQALISQLDTRFVSRIWDDKKMTAHHGIIPTRHVCDMSKMSDQEKQVYVLI RRHYLAQFFPLHEVDFTRLSLNIGGQLFQTTGRVVVVPGWKRLFSQDDGEHKEAAADEKDQSLPMLVKGDNCGVAGSEVK ALKTKPPQYFTFQSLIAAMMNAAAYVTDLTLKKVLKENAGLGTEATRGGIVETLLARNFISIKGRYLRATDIAMDLIDAL PHALKEPGMTALWEQALDEVAKGRMTLDSFMSRQTQWICQLVSLGTQQDVVVRVPPTPACPLCGSKTRLRKGAKGAFYGC EKYPDCKGMINVPGQSKNAASKTRKKKQN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 0.0 | 60 |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 0.0 | 60 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 0.0 | 60 |
| PMI2630 | YP_002152332.1 | DNA topoisomerase III | Not tested | Not named | Protein | 0.0 | 54 |
| topB | AAN62194.1 | putative DNA topoisomerase III | Not tested | PAGI-2(C) | Protein | 1e-173 | 50 |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 4e-162 | 50 |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 3e-172 | 50 |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 5e-161 | 50 |
