Gene Information

Name : Pecwa_0061 (Pecwa_0061)
Accession : YP_003257536.1
Strain : Pectobacterium wasabiae WPP163
Genome accession: NC_013421
Putative virulence/resistance : Unknown
Product : type VI secretion system effector
Function : -
COG functional category : S : Function unknown
COG ID : COG3157
EC number : -
Position : 65245 - 65763 bp
Length : 519 bp
Strand : -
Note : TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: eca:ECA4275 hypothetical protein

DNA sequence :
ATGCCAACTCCATGCTATATCAGCATCGAAGGTAAAACACAGGGCAACATTACTGCTGGTGCTTTCACCTCTGACTCTGT
CGGCAACATCTACGTGGAAGGCCACGAAGACGAGATGCTGGTTCAGGAATTTAAGCACATCGTCACCGTACCAACCGACC
CGCAGTCCGGTCAGCCATCCGGTCAGCGCGTCCACAAACCGTTCAAATTCACCGTCGCACTGAACAAAGCGGTGCCACTG
CTGTACAACGCGCTGTCTACTGGTGAAATGCTGCCGACCACGACCCTGAAGTGGTATCGCACCTCAGTGGAAGGCAAGCA
GGAACACTTCTTCTCTACCATCCTGACCGATGCCACCATCGTTGATATCGACTGCAAAATGCCACACTGTCAGGACCCGG
CCAAGCTAGACTACACCCAACTGATTGAAGTCTCGCTGGCTTACCGTAAAATCGACTGGGAGCACACTGTCGCTGGGACC
TCTGGCTCTGACGACTGGCGTGCGCCGGTCGAAGCCTAA

Protein sequence :
MPTPCYISIEGKTQGNITAGAFTSDSVGNIYVEGHEDEMLVQEFKHIVTVPTDPQSGQPSGQRVHKPFKFTVALNKAVPL
LYNALSTGEMLPTTTLKWYRTSVEGKQEHFFSTILTDATIVDIDCKMPHCQDPAKLDYTQLIEVSLAYRKIDWEHTVAGT
SGSDDWRAPVEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec16 YP_851428.1 hypothetical protein Not tested PAI II APEC-O1 Protein 1e-64 80
aec16 AAQ96710.1 Aec16 Not tested AGI-1 Protein 8e-65 80
HH0243 NP_859774.1 hypothetical protein Not tested HHGI1 Protein 1e-47 63