Gene Information

Name : Pecwa_4530 (Pecwa_4530)
Accession : YP_003261827.1
Strain : Pectobacterium wasabiae WPP163
Genome accession: NC_013421
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator, winged helix family
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 4971826 - 4972488 bp
Length : 663 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: pct:PC1_4240 transcriptional regulator

DNA sequence : 
ATGAGAATATTGTTAATCGAAGACGATCGCCTGATCGGTGATGGCCTAAAAGCTGGGTTGACCAAACTGGGCTTTACTAT
TGACTGGTTTACGGAAGGTAAAGCGGGTGCCGCCGCATTGAAGGCCGCACCTTATGATGCTGTGGTGCTCGATCTCAGCC
TGCCGGGTATGGATGGGATGGATATCCTACGCCAGTGGCGTCAGGCTGGACATGACGAACCGGTACTGATTCTGACCGCC
CGTGATGCGCTGGAACAGCGCGTGGAAGGGTTGCAACAGGGTGCCGATGATTATTTATGTAAGCCTTTTGCACTGACGGA
AGTTGCCGCTCGTCTACAGGCACTGATTCGCCGCCGTCACGGCCAGCTCCAACCTGAATTAACGCACGGTTCGGTTTCCC
TTGAACCGGGATCGCGGAGCGTCACGCTTAACTGCGAGCCGTTGATACTAAAATCCCGCGAACTGGCGCTGCTGGAACTG
TTTTTGCTCAATCCAAACCGTGTACTCACCCGTGCGCAGTTAGAAGAAAAGCTCTATGGGTGGGACGATGATGTCTCCAG
CAATGCGGTCGAAGTGCATATCCACCACCTGCGAAAAAAGCTGGGCAGCGGGTTTATCCGTACCGTGCATGGCATTGGCT
ATATTCTGGGAGATGCACCATGA

Protein sequence : 
MRILLIEDDRLIGDGLKAGLTKLGFTIDWFTEGKAGAAALKAAPYDAVVLDLSLPGMDGMDILRQWRQAGHDEPVLILTA
RDALEQRVEGLQQGADDYLCKPFALTEVAARLQALIRRRHGQLQPELTHGSVSLEPGSRSVTLNCEPLILKSRELALLEL
FLLNPNRVLTRAQLEEKLYGWDDDVSSNAVEVHIHHLRKKLGSGFIRTVHGIGYILGDAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-35 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pecwa_4530 YP_003261827.1 two component transcriptional regulator, winged helix family BAC0487 Protein 1e-33 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pecwa_4530 YP_003261827.1 two component transcriptional regulator, winged helix family VFG0473 Protein 6e-31 43