Name : Pecwa_4489 (Pecwa_4489) Accession : YP_003261788.1 Strain : Pectobacterium wasabiae WPP163 Genome accession: NC_013421 Putative virulence/resistance : Virulence Product : virulence-related outer membrane protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3637 EC number : - Position : 4922619 - 4923167 bp Length : 549 bp Strand : - Note : PFAM: virulence-related outer membrane protein; KEGG: eca:ECA0045 virulence-associated outer membrane protein DNA sequence : ATGAAAAAAACAACACTGCTGCTTTCCACTCTGATTGCTTGTGCCATGGGAATGTCTGCTGCTCAGGCGACACAAACGGT GTCATTGGGTTACGCTCAGGCGAAAGTTGAGGATTTTAAAGATCTGAAAGGAGTTACGGCCAAATACCATTATCAGGGTG ATTCCGCACTGGGTATTATTGGTTCTTTTACCTATTTAAGCGGTAAAAAAGATTATAATCAGCGAGCTATTGGATTCAGC TCACACGAGAGCGACGATGTTAAATATTACTCTCTAATGGCAGGGCCTTCCTATCAACTTAACGATATTGTTAGTGTTTA TGGTCTTGCTGGTTTAGGTCATGCTAAGGTGGACAATTCGCGTCACTATACATCCTCTAGTGTGTCAGGAAGCGAAAGTT ATAGTGAGAGTAAAACCAAATTTGCTTACGGTGCCGGTATTCAAATTACGCCAGCAGCAAACTGGGCGATTGATATTGGC TACGAAGGCACGAAAATCTATGAAGCTCGTGTAAACGGCTTTAATATTGGCGTCGGCTATCGTTTCTGA Protein sequence : MKKTTLLLSTLIACAMGMSAAQATQTVSLGYAQAKVEDFKDLKGVTAKYHYQGDSALGIIGSFTYLSGKKDYNQRAIGFS SHESDDVKYYSLMAGPSYQLNDIVSVYGLAGLGHAKVDNSRHYTSSSVSGSESYSESKTKFAYGAGIQITPAANWAIDIG YEGTKIYEARVNGFNIGVGYRF |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
Z4321 | NP_289546.1 | PagC-like membrane protein | Not tested | OI-122 | Protein | 1e-25 | 45 |
pagC | YP_216243.1 | PhoP regulated protein: reduced macrophage survival | Not tested | SPI-11 | Protein | 1e-28 | 45 |
Z4321 | AAQ19134.1 | putative PagC-like membrane protein | Not tested | PAI I CL3 | Protein | 1e-24 | 44 |
unnamed | ADD91732.1 | putative PagC-like membrane protein | Not tested | PAI-I AL862 | Protein | 1e-26 | 44 |
pagC | AGI37350.1 | PagC | Virulence | OI-122 | Protein | 5e-17 | 43 |
pagC | AGI37337.1 | PagC | Virulence | OI-122 | Protein | 5e-17 | 43 |
pagC | AGI37342.1 | PagC | Virulence | OI-122 | Protein | 5e-17 | 43 |
pagC | AGI37344.1 | PagC | Virulence | OI-122 | Protein | 5e-17 | 43 |
pagC | AGI37346.1 | PagC | Virulence | OI-122 | Protein | 5e-17 | 43 |
pagC | AGI37348.1 | PagC | Virulence | OI-122 | Protein | 3e-17 | 43 |
pagC | AGI37351.1 | PagC | Virulence | OI-122 | Protein | 3e-17 | 43 |
pagC | AGI37340.1 | PagC | Virulence | OI-122 | Protein | 1e-17 | 43 |
pagC | AGI37347.1 | PagC | Virulence | OI-122 | Protein | 1e-17 | 43 |
pagC | AGI37341.1 | PagC | Virulence | OI-122 | Protein | 1e-16 | 42 |
pagC | AGI37349.1 | PagC | Virulence | OI-122 | Protein | 1e-16 | 42 |
pagC | AGI37352.1 | PagC | Virulence | OI-122 | Protein | 1e-16 | 42 |
pagC | AGI37353.1 | PagC | Virulence | OI-122 | Protein | 2e-16 | 41 |
pagC | AGI37343.1 | PagC | Virulence | OI-122 | Protein | 2e-16 | 41 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
Pecwa_4489 | YP_003261788.1 | virulence-related outer membrane protein | VFG0442 | Protein | 8e-28 | 43 |