Gene Information

Name : Pecwa_4440 (Pecwa_4440)
Accession : YP_003261739.1
Strain : Pectobacterium wasabiae WPP163
Genome accession: NC_013421
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.3
Position : 4863518 - 4865053 bp
Length : 1536 bp
Strand : -
Note : PFAM: aldehyde dehydrogenase; KEGG: eca:ECA0094 aldehyde dehydrogenase B

DNA sequence :
ATGGCGCACGATAATCTCGAAGGCCGATCTGCATCTGGTGACGTCGGCTTTCTTAATCTGAAAAAACGCTATGACAATTT
TATCGGCGGAGCTTGGGTTCCACCTGATGCGGGTCAGTATTTTGTTAATTTGACGCCAGTAACGGGTCAACCGATGTGTG
AAGTAGCCAGTTCGACAACGCGAGATATTGACCATGCGTTGGATGCTGCTCATAACGCAAAAGCGGAATGGGGTGGCCTG
TCGGTGCAGGAACGGGCGCTGGTGCTTAATCGTATTGCCGACCGGATGGAACAAAACCTTGAACGGCTGGCGCAGGTGGA
AACCTGGGATAACGGCAAACCAATACGTGAAACCAGCGGGGCGGATGTGCCGCTGGCGATTGACCACTTCCGCTATTTCG
CGGCCTGTATCCGGGCACAAGAGGGGGCGATTAGCGAAATCGACGGCGACACGGTGGCCTATCATTTTCATGAACCTCTC
GGTGTTGTTGCGCAGATTATTCCCTGGAACTTCCCGCTGCTGATGGCCTGTTGGAAGATGGCACCAGCACTGGCCGCCGG
TAACTGTATTGTGCTGAAGCCTGCCAAGTTGACGCCGATGTCGGTGCTAATTTTGATGGAGCTGATTCAGGATCTATTAC
CTGCGGGGGTCATTAATGTCGTCAATGGGTCGGGAAGCGAGATTGGTGAGTATCTGGCAACATCGAAACGCGTTGCGAAA
GTTGCGTTCACCGGATCGACCGAGGTTGGCCAGCAGATCATGAGCTATGCGGCGCAAAACGTGACGCCGGTGACGCTGGA
ACTGGGTGGTAAATCGCCAAACATCTTTTTTGCCGATGTGATGGATAAGGAAGATAGCTTCTTTGATAAAGCGCTCGAAG
GTTTCACGCTGTTTGCCTTCAATCAGGGAGAAGTTTGCACCTGCCCGAGCCGCGCACTAGTGCAGGAATCGATCTATGAT
CGCTTTATGGAGCGGGCAATCAAGCGCGTTGAGGCTATCCGTATCGGTAACCCGCTGGACAGCAAAACCATGATGGGCGC
ACAGGTGTCAGCAGGCCAGCTTGATACCATCCTTAACTATATTGATATCGGTAAGAAAGAGGGCGCTCGGGTGCTCACGG
GTGGCCAGCGTAAGGCTATGCCAGATGGGCTGGCGGAAGGTTACTATCTGGAGCCGACGATATTGTTCGGTAAAAACAGC
ATGCGTGTCTTCCAGGAGGAAATCTTTGGCCCGGTGCTGGCGGTAACGACGTTCAAGACGATGGATGATGCACTGGAGAT
AGCCAACGACACGGAATACGGTCTGGGCGCAGGCGTGTGGAGCCGCAATGGTAATATCGCTTACCGAATGGGGCGTGGCA
TTCAGGCGGGTCGAGTTTGGACCAATTGTTATCACGCCTATCCGGCACATGCTGCGTTTGGGGGCTATAAGCAGTCTGGT
ATCGGGCGTGAAAACCATAAAATGATGTTGGAACACTATCAACAAACTAAATGCCTGTTGGTGAGCTACTCTGATAAGCC
GATGGGGCTGTTCTAA

Protein sequence :
MAHDNLEGRSASGDVGFLNLKKRYDNFIGGAWVPPDAGQYFVNLTPVTGQPMCEVASSTTRDIDHALDAAHNAKAEWGGL
SVQERALVLNRIADRMEQNLERLAQVETWDNGKPIRETSGADVPLAIDHFRYFAACIRAQEGAISEIDGDTVAYHFHEPL
GVVAQIIPWNFPLLMACWKMAPALAAGNCIVLKPAKLTPMSVLILMELIQDLLPAGVINVVNGSGSEIGEYLATSKRVAK
VAFTGSTEVGQQIMSYAAQNVTPVTLELGGKSPNIFFADVMDKEDSFFDKALEGFTLFAFNQGEVCTCPSRALVQESIYD
RFMERAIKRVEAIRIGNPLDSKTMMGAQVSAGQLDTILNYIDIGKKEGARVLTGGQRKAMPDGLAEGYYLEPTILFGKNS
MRVFQEEIFGPVLAVTTFKTMDDALEIANDTEYGLGAGVWSRNGNIAYRMGRGIQAGRVWTNCYHAYPAHAAFGGYKQSG
IGRENHKMMLEHYQQTKCLLVSYSDKPMGLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 7e-149 63
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 7e-155 62
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 7e-155 62
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 7e-155 62
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-154 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pecwa_4440 YP_003261739.1 aldehyde dehydrogenase VFG0082 Protein 3e-149 63