Gene Information

Name : Pecwa_4397 (Pecwa_4397)
Accession : YP_003261696.1
Strain : Pectobacterium wasabiae WPP163
Genome accession: NC_013421
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : R : General function prediction only
COG ID : COG1123
EC number : -
Position : 4818357 - 4820228 bp
Length : 1872 bp
Strand : +
Note : PFAM: ABC transporter; oligopeptide/dipeptide ABC transporter; SMART: ATPase AAA; KEGG: pct:PC1_4108 ABC transporter related

DNA sequence :
ATGACGGATATCATGCACGCGGGTGCCGCCACAGCACCCGGTAACGCCTCCAGACCTGTACTGGAAATCGACGATCTGAG
CGTTAGTTTTAGCGGCCGTTCCGGCACGCATCAGGCACTAAAAGGCATTTCCTTTACCGTCAATAAAGGGGAAGTGGTCG
CCGTGGTAGGCGAAAGTGGTTCAGGTAAATCCGTGACATCACTCACCGTGATGGGATTGCTGGCAGATTCTGCCAACATC
GGGCACGGTGCAATCCGTTTCACCGCACGCGACGACCAACAACATGACTTGTTGAGCATGAAAGCAGAAGCGCGCCGTAA
GCTGCGCGGCCGCGAGCTCGCCATGATCTTTCAGGAACCGATGACCTCACTGAATCCGGTGCTGAAAGTCGGCGATCAGC
TCACCGAAGCCCTGCTTGATCACGAAATCTGTGATGCCGCCAGTGCCGACAAAAAAGCCCGTGAACTGCTGCGCAAAGTG
CGCATTGCAGACGTCGATCGCGTGATGAAAAGCTACCCGCACTCGCTGTCCGGCGGGATGCGCCAACGTGTGATGATTGC
CCAAGCGCTGGCCTGCGATCCGCAACTGTTGATAGCTGATGAACCCACCACCGCGTTGGATGTCACCGTGCAGGCACGCA
TTCTGCAAATCCTGCGCGACCTGCAACAACAGAGCGACATGGCGGTATTGTTTATTACCCACGATATGGGCGTAGTCGCA
GAAATCGCTGACCGCGTCGTGGTGATGTATCGCGGCGAAATCGTAGAGCAAGGCACTGTCGAACAGATTTTCGCAGCACC
GCAGCACCCATACACCCAATCGCTGCTGGCCGCCGTACCCAAACTGGGCGACATGCGCGAGAGCCTGTGGCCGAAACGCT
TCCCGCTGTTGGGGCAGGCCGCCGACCCAGACAACATTGAACAGGTTACCGCCCGCTATGATGCCGAACCGCTGTTAGAT
ATTCGCGGGCTGCGCGTCTATTACCCGATACGCAGTGGGATTTTATCTAAGGTGACCCACCACGTTCACGCGGTAGAGCA
GATCGATTTCAACGTCTGGCCGGGCGAAACGCTGGCGATCGTCGGCGAAAGCGGCTGTGGCAAATCCACCACCGGACGCG
CCCTGCTGCGTCTGGTACAGAGCGAAGCCGAGAGCATTCATTTTCAGGGCAACGAAATTTCTCAGATGAAAGAGCGCGAT
TTCCAGCCGCTGCGTCGGGAAATGCAGATGGTGTTTCAAGACCCGTATGCCTCGCTCAATCCGCGCCTGACGGTCGGCTT
CACCATCGCTGAACCGCTGCTGCTGCACGGGTTGGTGAAATCACTGGAAGAGGCAACGCCGCAGGTACAGGCGCTGCTCA
AAAGCGTCGGTCTATTGCCTGAACACGCTCGCCGTTATCCACACGAATTTTCCGGCGGACAGCGCCAGCGTATCGCGATT
GCCCGCGCGATGGCGCTACAACCCCAGGTCATTATTGCTGACGAAGCCGTCTCGGCGCTCGATGTGTCAATTCAGGCACA
GGTCGTCAACCTGATGATGGATCTCCAGAAGAAAACCGGCGTGTCGTGGATTTTCATCTCGCACGATATGGCGGTGGTCG
AACGCATCGCCAACCGCGTCGCGGTGATGTACCTCGGCCAAATTGTGGAAATCGGCCCGCGCCAGTCGGTGTTTAACGAT
CCGCAGCATCCGTATACCCGCCGCCTGTTGGCCTCGGTTCCGATTGCCGATCCAACCCGTCGTGGTACACGCCAGTTTGA
CGACAGCGAAATCCCCTCCCCCTTACGTAAAGCAGGTGAGGCCGTCGCCAAAACGCGCTACCGCGAGGTTGCGCCGCAGC
ACTGGGTTGCCGACAACGAATCGGCTGCCTGA

Protein sequence :
MTDIMHAGAATAPGNASRPVLEIDDLSVSFSGRSGTHQALKGISFTVNKGEVVAVVGESGSGKSVTSLTVMGLLADSANI
GHGAIRFTARDDQQHDLLSMKAEARRKLRGRELAMIFQEPMTSLNPVLKVGDQLTEALLDHEICDAASADKKARELLRKV
RIADVDRVMKSYPHSLSGGMRQRVMIAQALACDPQLLIADEPTTALDVTVQARILQILRDLQQQSDMAVLFITHDMGVVA
EIADRVVVMYRGEIVEQGTVEQIFAAPQHPYTQSLLAAVPKLGDMRESLWPKRFPLLGQAADPDNIEQVTARYDAEPLLD
IRGLRVYYPIRSGILSKVTHHVHAVEQIDFNVWPGETLAIVGESGCGKSTTGRALLRLVQSEAESIHFQGNEISQMKERD
FQPLRREMQMVFQDPYASLNPRLTVGFTIAEPLLLHGLVKSLEEATPQVQALLKSVGLLPEHARRYPHEFSGGQRQRIAI
ARAMALQPQVIIADEAVSALDVSIQAQVVNLMMDLQKKTGVSWIFISHDMAVVERIANRVAVMYLGQIVEIGPRQSVFND
PQHPYTRRLLASVPIADPTRRGTRQFDDSEIPSPLRKAGEAVAKTRYREVAPQHWVADNESAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 6e-83 41