Gene Information

Name : rph (Pecwa_4395)
Accession : YP_003261694.1
Strain : Pectobacterium wasabiae WPP163
Genome accession: NC_013421
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 4816385 - 4817101 bp
Length : 717 bp
Strand : -
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
ATGCGCCCAACAGGCCGAAGTGCACAGCAAGTACGCCCCCTTACATTCACCCGTCATTACACGAAACACGCCGAAGGTTC
CGTTTTGGTCGAGTTTGGCGACACCAAAGTGTTATGCAATGCCACGGTAGAAGAGGGTGTTCCGCGCTTTCTGAAAGGTC
AGGGGCAAGGATGGGTCACTGCCGAATACGGTATGCTGCCACGTGCGACGCACAGCCGTAACGCGCGTGAAGCCGCCAAA
GGCAAGCAGGGGGGGCGGACGCTGGAGATCCAGCGCCTGATCGCACGTTCCCTGCGTGCGGCTATCGACCTGAAAGTGCT
CGGCGAATACACCATCACGCTCGACTGTGATGTGTTGCAGGCGGATGGTGGCACGCGTACTGCGTCCATCACCGGTGCCT
GCGTTGCGCTAGCAGATGCGTTGAACCAGATGGTTGCCAAGGGTAAGCTGAAAAAGAACCCGATGAAAGGTATGGTCGCG
GCGGTTTCCGTCGGTATCGTTAACGGCGAAGCGTTGTGCGATCTGGAATACGTGGAAGATTCTGCTGCTGAAACTGACAT
GAATGTGGTCATGACCGAAGATGGCCGCATGGTTGAAGTGCAGGGGACGGCCGAAGGTGAGCCGTTTAGCCACGAAGAAT
TACTCACCCTGCTGGCGCTAGCCCGAGGGGGAATCGATACCATCGTTCAGGCGCAGAAAGCGGCCTTAGCCGATTGA

Protein sequence :
MRPTGRSAQQVRPLTFTRHYTKHAEGSVLVEFGDTKVLCNATVEEGVPRFLKGQGQGWVTAEYGMLPRATHSRNAREAAK
GKQGGRTLEIQRLIARSLRAAIDLKVLGEYTITLDCDVLQADGGTRTASITGACVALADALNQMVAKGKLKKNPMKGMVA
AVSVGIVNGEALCDLEYVEDSAAETDMNVVMTEDGRMVEVQGTAEGEPFSHEELLTLLALARGGIDTIVQAQKAALAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 5e-62 58