Gene Information

Name : hemC (Pecwa_4171)
Accession : YP_003261502.1
Strain : Pectobacterium wasabiae WPP163
Genome accession: NC_013421
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 4596466 - 4597407 bp
Length : 942 bp
Strand : +
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis

DNA sequence :
ATGTTAGCCAATATTATTAGAATTGCCACCCGACAAAGCCCGCTGGCCTTATGGCAAGCACGATATGTTCAGCAGCGTTT
GAACCATCTCTACCCCGATTTATCCGTGGAACTTGTGCCGATGGTGACCCGCGGCGACATCATTCTGGATACGCCACTGG
CAAAGGTTGGCGGTAAGGGATTGTTTGTTAAAGAGCTGGAACTCGCGCTGCTTGAAGGGCGCGCCGATATCGCCGTTCAT
TCCATGAAAGATGTGCCTGTCGAATTTCCCGATGGCCTTGGCCTGACCACCATTTGTGAACGTGACGACCCACGCGACGC
TTTTGTTTCCAATCATTACGACAGCCTCGACCAATTACCGCAAGGCAGTTGTGTCGGCACCTCCAGCCTGCGCCGCCAGT
GCCAACTGCGCGCCCGACGTCCCGATCTGGTGATTCGTGATTTGCGCGGCAATGTCGGCACACGTCTGTCAAAACTGGAC
AACGGCGAGTATGACGCCATTATTCTTGCTGTCGCAGGTCTGAAACGCCTCGGGCTTGAAGAACGCATCCGCTGTGCGTT
AAGCCCGGAAGAGTCTCTGCCTGCCGTCGGACAAGGCGCTATCGGCATCGAATGCCGTTTGGATGACGATCGCATTCGCC
AACTCCTTGCCCCACTCAATCACACCGATACCGCCGCACGCGTATTGGCTGAACGCGCGATGAATGTGCGCCTTGAAGGC
GGCTGTCAGGTGCCGATTGGCAGCTACGCCGAACTGGAAGGCAATACGTTATGGTTGCGTGCGCTGGTTGGTGCACCGGA
TGGCAGCCAGATGATTGTCGGTGAACGTAAAGGAAGCGTCGTTGACGCTGAAAAAATCGGCATTGCCTTGGCTGAAGAGC
TGTTAGCGAAAGGGGCCAGCGCCATCCTTCAGGCCGTTTATCAAGGGTCAAGTTCATCATGA

Protein sequence :
MLANIIRIATRQSPLALWQARYVQQRLNHLYPDLSVELVPMVTRGDIILDTPLAKVGGKGLFVKELELALLEGRADIAVH
SMKDVPVEFPDGLGLTTICERDDPRDAFVSNHYDSLDQLPQGSCVGTSSLRRQCQLRARRPDLVIRDLRGNVGTRLSKLD
NGEYDAIILAVAGLKRLGLEERIRCALSPEESLPAVGQGAIGIECRLDDDRIRQLLAPLNHTDTAARVLAERAMNVRLEG
GCQVPIGSYAELEGNTLWLRALVGAPDGSQMIVGERKGSVVDAEKIGIALAEELLAKGASAILQAVYQGSSSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 6e-84 61
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 6e-84 61