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Name : Pecwa_4124 (Pecwa_4124) Accession : YP_003261459.1 Strain : Pectobacterium wasabiae WPP163 Genome accession: NC_013421 Putative virulence/resistance : Virulence Product : ribokinase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0524 EC number : - Position : 4542277 - 4543488 bp Length : 1212 bp Strand : + Note : KEGG: ect:ECIAI39_4374 carbohydrate kinase; TIGRFAM: ribokinase; PFAM: PfkB domain protein; regulatory protein DeoR; phosphomethylpyrimidine kinase type-1; SMART: regulatory protein DeoR DNA sequence : ATGTTTCTAGAAGAAAGACGTAATCAGATTCTGGCCTATCTGGCCAAACATGAACGCGCCAGCGTCGATTATCTGGCAAC GGCCTTTGCCGTTAGCAAAGAAACTATCCGCAGTGATTTGAATGAACTGGCACGGTTGCACCTGATTCAGCGCTGCTACG GCGGAGCCATCATCGTGCGACGTCTTCTACAGTCCGAATTAATCGCCCCGTCTGGCGAGAATTTCGAAGTACTGCTGAAG CGGTTAGAAAAACAGAACAGACATCAAACCAGCAAACAGAAAGGAAATTCGATGAACGGCAAGGTGTGTATTTTAGGATC GTTCAATGTTGATATCGTCGCCAAGGTGATGCGTTTTCCCAAGGGCGGTGAATCCATCATGGCTCAGGGCAGCGCGATCG GCCCTGGGGGTAAAGGTGCTAACCAGGCCATGGCTGCCAGTCGGGCAGGTGCACAGGTCTATTTCATCGCTAAAGTGGGT ACCGACCAATTTAGCCAATTTGCCTACGATCATTTTACGGCATCAGACATTCACTCGTTCAAGCTGTACCAGTCAGATAG CGAACCCACGGGTAACGCGATCATTTACGTCTCGCAGCAAAACGGCGAAAACATGATCGCCATTCACCCCGGTGCTAACC AAACCATTACCGATGACGAAGTCGCCGCCATCGCGTCAGAACTCACTACCTCAGACGTACTGCTGGTGCAGTTAGAGAAT AACTTTTCCGCAACGCTGAACGCGATCAAGCTGGCCCATACGCTGGGCAAGAAAGTGATTCTTAACCCCGCACCTTACTC CAGCGAGATCCTGCCCTATCTGGATTATCTCGACGTCATCACGCCCAACGAGACGGAAGCCTCGCTTCTATCCGGCATTG ATATTCACGATGTTGACGATGCCAAAGAAGCAGCGCTGAAAATCGCTGCTCTGGGAGCCAAACGCGTGATTATCACCATG GGCTCCCGCGGTGCACTGTTATTGGACGGCAAACAATTCCAGCATATTCCTGCCTTTCCGGCACTCGGTGTCGATACTAC CGGCGCAGGGGATGCATTCAACGGCGCGTTTGCCGCCGCGCTCGCTAACGGGCAGAGCCTGGTGCAGGCAGCCACTTACG CTTCTGCCTTTGCCTCCCTCGCCGTTGAACGTGAAGGAGCCTCTAACATGCCTGAACATCAACAAGTTATTGCACGTTTA TCGCAACGCTAA Protein sequence : MFLEERRNQILAYLAKHERASVDYLATAFAVSKETIRSDLNELARLHLIQRCYGGAIIVRRLLQSELIAPSGENFEVLLK RLEKQNRHQTSKQKGNSMNGKVCILGSFNVDIVAKVMRFPKGGESIMAQGSAIGPGGKGANQAMAASRAGAQVYFIAKVG TDQFSQFAYDHFTASDIHSFKLYQSDSEPTGNAIIYVSQQNGENMIAIHPGANQTITDDEVAAIASELTTSDVLLVQLEN NFSATLNAIKLAHTLGKKVILNPAPYSSEILPYLDYLDVITPNETEASLLSGIDIHDVDDAKEAALKIAALGAKRVIITM GSRGALLLDGKQFQHIPAFPALGVDTTGAGDAFNGAFAAALANGQSLVQAATYASAFASLAVEREGASNMPEHQQVIARL SQR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_1076 | YP_853096.1 | carbohydrate kinase | Not tested | PAI IV APEC-O1 | Protein | 4e-63 | 50 |
| rbsk | YP_216390.1 | DeoR family transcriptional regulator | Not tested | SPI-2 | Protein | 5e-60 | 49 |
| orf408 | NP_460347.1 | regulatory protein | Not tested | SPI-2 | Protein | 1e-59 | 48 |
| ORF 408 | CAB37417.1 | - | Not tested | SPI-2 | Protein | 9e-60 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Pecwa_4124 | YP_003261459.1 | ribokinase | VFG0483 | Protein | 5e-60 | 48 |
