Gene Information

Name : Pecwa_4019 (Pecwa_4019)
Accession : YP_003261355.1
Strain : Pectobacterium wasabiae WPP163
Genome accession: NC_013421
Putative virulence/resistance : Unknown
Product : alanine racemase
Function : -
COG functional category : R : General function prediction only
COG ID : COG0325
EC number : -
Position : 4423101 - 4423913 bp
Length : 813 bp
Strand : -
Note : PFAM: alanine racemase domain protein; KEGG: eca:ECA4047 alanine racemase

DNA sequence :
ATGCCGATATCTTCCGATACACCGACTCGCCATGACAGCCACGGTCGCTACCCTGAAGCTGCCACGGTTGAAGATTTCCA
ACGTAATCTGGCTGCGGTACAGATGCGTATCGCTGCGGCCTGCCATCGTGTCGGCCGCGATCCTGCCACCGTGCGCTTAC
TGCCAGTCAGCAAGACTAAACCAGAAAATCGCCTGCGTATGGCCTATATGGCAGGTTGCCGGATAGTGGGTGAGAACAAA
GTGCAGGAGGCAAACCGCAAATGGGAAGCTATGCAGGACTTGGCTGACTTACAGTGGTCGGTCATTGGCCACTTGCAAAC
CAACAAGGCTAAGCTGGTGGCACGCTTCGCTAGCGAATTTCAGGCATTGGATAGCCTGCGGCTGGTTGAAGCATTGGATC
GCCGCTTGCTCGTTGAAGGACGTTCACTAGATGTCTTCGTGCAGGTTAACACCTCCGGTGAGGCCAGTAAGTACGGCCTG
TCGCCTGAAGATGTTCCCGCTTTTATTCAGGCGCTTCCCGCATTCCCTGCGCTACGTGTGCGTGGGCTCATGACGCTGGC
GCTGTTTTCCAACGAGGCTGAACGTGTGCGTCAGTGTTTTATTCGACTGCGTAACCTGCGCGACCGGTTGCAGCAAAACG
CGCCTGCTGGCATCGGGCTGGATGAATTATCTATGGGAATGTCCGGCGATTTTGAGATCGCGATCGAGGAAGGTGCCACT
GTAGTACGCGTCGGTCAGGCGATCTTCGGTGCACGCCCTTTGCCAGATAGCTACTACTGGCCTGATGAAGCCACCACAGA
AGTACATCTTTAA

Protein sequence :
MPISSDTPTRHDSHGRYPEAATVEDFQRNLAAVQMRIAAACHRVGRDPATVRLLPVSKTKPENRLRMAYMAGCRIVGENK
VQEANRKWEAMQDLADLQWSVIGHLQTNKAKLVARFASEFQALDSLRLVEALDRRLLVEGRSLDVFVQVNTSGEASKYGL
SPEDVPAFIQALPAFPALRVRGLMTLALFSNEAERVRQCFIRLRNLRDRLQQNAPAGIGLDELSMGMSGDFEIAIEEGAT
VVRVGQAIFGARPLPDSYYWPDEATTEVHL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1555 YP_005681817.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 2e-38 51
CpC231_1557 YP_005683917.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 2e-38 51
cpfrc_01564 YP_003783964.1 hypothetical protein Not tested PiCp 6 Protein 2e-38 51
CpI19_1562 YP_005686005.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 2e-38 51