Gene Information

Name : Pecwa_3894 (Pecwa_3894)
Accession : YP_003261232.1
Strain : Pectobacterium wasabiae WPP163
Genome accession: NC_013421
Putative virulence/resistance : Unknown
Product : L-xylulose 5-phosphate 3-epimerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3623
EC number : 5.1.3.22
Position : 4299152 - 4300012 bp
Length : 861 bp
Strand : +
Note : L-xylulose 5-phosphate 3-epimerase activity not yet demonstrated; may be involved in the utilization of 2,3-diketo-L-gulonate

DNA sequence :
ATGCGCCAACACCCATTAGGTATTTATGAAAAAGCCCTGCCGAAACACCTGACCTGGCCAGAGCGCCTGGCGCTGGCAAA
AGCCTGTGGTTTTGACTTTGTTGAAATGTCGGTAGACGAAAGCGATGAACGTCTGGCTCGCCTGCTGTGGAGTAAGGAAC
AGCGGCTTTCGTTGGTCAACGCGATGCTGGAAACCGGCATTCGCATCCCTTCGATGTGCTTATCCGGACATCGGCGTTTT
CCGTTCGGCAGCCATGATGAAACACTACGCCAACGTGCCTTTACGATCATGGAGCAGGCCATTCAATTGGCCAACGATGT
GGGCATCCGCACCATTCAGTTAGCTGGGTATGACGTTTATTACGAGCAGCAGGATGAGGGCACGCTCGCTCGCTTTACCG
AAGGTATGCAATGGGCGGTTGAACGCGCTGCCGCCGCGCAGGTGATGCTATCCGTGGAGATCATGGATACCGCCTTTATG
AACTCTATCAGTAAGTGGAAAGCCTGGGATGCCTGTCTGGCTTCACCGTGGTTTACCGTCTACCCAGATGTCGGAAACCT
CAGTGCCTGGGGCAACAATGTCACGCAAGAATTACAGTTGGGTATCGATCGCATCGCCGCTATCCATCTGAAAGACACTT
TAGCCGTTACCGCAAACTCGCCCGGACAGTTCCGCGACGTGCCATTCGGTGAAGGCTGTGTGGATTTCGTGTCCGTTTTT
AGCACGCTGAAAGCACTCAATTATCGTGGTGCTTTCCTGATTGAAATGTGGACGGAGAAAGCGGATGAGCCAGTCGCCGA
GATCGTTCAGGCGCGCCGCTGGATCGAGCAGAAAATGCAACAAGGGGGAATGCCATGCTAA

Protein sequence :
MRQHPLGIYEKALPKHLTWPERLALAKACGFDFVEMSVDESDERLARLLWSKEQRLSLVNAMLETGIRIPSMCLSGHRRF
PFGSHDETLRQRAFTIMEQAIQLANDVGIRTIQLAGYDVYYEQQDEGTLARFTEGMQWAVERAAAAQVMLSVEIMDTAFM
NSISKWKAWDACLASPWFTVYPDVGNLSAWGNNVTQELQLGIDRIAAIHLKDTLAVTANSPGQFRDVPFGEGCVDFVSVF
STLKALNYRGAFLIEMWTEKADEPVAEIVQARRWIEQKMQQGGMPC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
M5005_Spy_0152 YP_281516.1 L-xylulose 5-phosphate 3-epimerase Not tested Not named Protein 6e-69 56