|
Name : murD (Pecwa_3782) Accession : YP_003261124.1 Strain : Pectobacterium wasabiae WPP163 Genome accession: NC_013421 Putative virulence/resistance : Unknown Product : UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0771 EC number : - Position : 4174409 - 4175725 bp Length : 1317 bp Strand : - Note : UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation DNA sequence : ATGGTGGACTATCAGGGTAAAAAAGTCGTCATTATCGGGTTGGGTCTGACCGGGCTCTCCTGTGTTGATTTCTTTCTCGC GCGTGGTGTTGTACCGCGTGTGGTGGATACCCGTATCAGTCCACCGGGCTTGGATAAGCTGCCGGAGCAGGTGGAACGGC ATCTCGGTAGCCTCAATGAAGACTGGCTGATGAATGCGGATTTGATCGTCGCCAGCCCCGGCGTTGCATTGGCGACGCCG ATTCTGTGTGACGCTGCTGATGCTGGTATTGAGATTGTTGGCGATATCGAACTGTTCTGTCGTGAAGCACAGGCACCTAT TGTGGCGATTACCGGTTCGAACGGCAAAAGTACGGTGACGACGTTGGTCGGTGAAATGGCGCGCGCTGCAGGTTGGCAGG TGGGCGTCGGTGGCAACATTGGTCTCCCTGCGTTGCAGTTGCTGGAACAGCCCGCTCAGCTTTATGTCCTGGAGTTGTCG AGTTTCCAATTGGAAACGACGAGTAGCCTGCACGCCGCTGCGGCTACCATTCTGAACGTAACGGAAGATCACACCAACCG TTACCCGTTTGGCCTACAGCAGTATCGTGCAGCGAAATTGCGGATTTATGAACATGCGGACCTGTGCGTTGTGAACGCAG ACGATGCGTTGACCATGCCGATTCGCGGTGCAGATGTGCGCTGCCGCAGTTTTGGTGTTGATGTCGGTGATTATCATCTT AACCGTCAGCAGGGCGAAACCTGGCTGCGGGTGAACGGTGAACGAGTGCTCAACACCCGTGAAATCAAGCTTGTCGGGCA ACATAATTACACGAACGCATTGGCGGCGCTGGCGCTGGCTGATGCTGTGAAGATCCCTCTGGCTTCTGCACTGACGGCAT TGACGGCATTTACCGGGCTACCGCATCGCTTCCAAATGGCCTTTGAGCGCGATGGCGTGCGGTGGATCAATGATTCTAAA GCCACCAATGTGGGCAGCACCGAAGCGGCATTAAGCGGTTTGACCGTCGACGGCACGTTGCATCTGCTGTTAGGTGGTGA TGGAAAATCTGCCGACTTCTCGCCGCTGGTGCCCTATTTTCAGGGGGAGCGTATTCGTTTGTATTGCTTTGGTCGTGATG CTGCACAACTGGCTGCATTACGCCCGGAAATTGCCGAACAGACAGAAACAATGGAACAGGCGATGCGCGTCATCGCTGAA CGCATTAAGCCGGGTGACATGGTGCTGCTGTCGCCAGCTTGCGCAAGCCTGGATCAGTTTCGTAGTTTTGAACAGCGAGG CGACGAATTTGCTCGCTTGGCGAAGGAATTAGGTTGA Protein sequence : MVDYQGKKVVIIGLGLTGLSCVDFFLARGVVPRVVDTRISPPGLDKLPEQVERHLGSLNEDWLMNADLIVASPGVALATP ILCDAADAGIEIVGDIELFCREAQAPIVAITGSNGKSTVTTLVGEMARAAGWQVGVGGNIGLPALQLLEQPAQLYVLELS SFQLETTSSLHAAAATILNVTEDHTNRYPFGLQQYRAAKLRIYEHADLCVVNADDALTMPIRGADVRCRSFGVDVGDYHL NRQQGETWLRVNGERVLNTREIKLVGQHNYTNALAALALADAVKIPLASALTALTAFTGLPHRFQMAFERDGVRWINDSK ATNVGSTEAALSGLTVDGTLHLLLGGDGKSADFSPLVPYFQGERIRLYCFGRDAAQLAALRPEIAEQTETMEQAMRVIAE RIKPGDMVLLSPACASLDQFRSFEQRGDEFARLAKELG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00311 | YP_008207776.1 | UDP-N-acetylmuramoylalanine-D-glutamate ligase | Not tested | AbaR25 | Protein | 1e-45 | 42 |
| BJAB0868_00315 | YP_008211641.1 | UDP-N-acetylmuramoylalanine-D-glutamate ligase | Not tested | AbaR26 | Protein | 1e-45 | 42 |
