|
Name : Pecwa_3763 (Pecwa_3763) Accession : YP_003261105.1 Strain : Pectobacterium wasabiae WPP163 Genome accession: NC_013421 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 4155148 - 4156620 bp Length : 1473 bp Strand : + Note : PFAM: type II secretion system protein E; SMART: AAA ATPase; KEGG: eca:ECA3799 hypothetical protein DNA sequence : ATGACTGACTCCGCCTTTTCCACCGAACGTACACTCAGCGAGTTACAGACGTTGTGCCGACGTTATCAGGCATTATTACT CAGCATTGATGAACAAACGCTGTCGGTCGCCGTCACGGTGTCCCCTTCTTCAGAGATGATCGCCGCACTGCGTTTCGCCA GCAACCGTCGAATTATGGTGGAACAGTGGCCACAGGCCAGAATGGAACAACAGCTTAACCCAGTGAACGCCGTTGCGGAG CCCGCAGAAACCTATCATGCCGGTACTTATCACACCAACATCGGGCAGCAGGATCATGGCGACGATTCCCCCGTCGCGCA GTTTATCCATCAAACGCTGCGCCTCGCCGTTCAGCGCCGCGCCTCTGATATTCACTTTGAGCCACAGCCAGACAACTACC GTGTGCGGCTACGCATTGACGGTGTATTGCAAGCCATATCCGCGCCACCTCCAGAGTTGACAGGCCGGATTACCGCAAGG CTGAAAATCATGGGCAAATTGAATATCGCCGAACGGCGGTTACCGCAGGATGGTCAGTTTAGCCTAATGCTGGATCAACA GCCCTATTCGTTACGCATCGCCACCCTCCCCGTGCAGCAGGGAGAAAAAGTCGTACTGCGTATTTTACAAACGCACCAGC AAGAGCTGGCACTGGATAAACTCGGACTCACCGCAAAGGCATTACAGCAGGTTATTAGTGTGCTGAGCGCCGCACAGGGG ATGATACTCGTCACCGGCCCAACAGGCAGTGGCAAAACCGTGACGCTTTACAGTGCGATACGCTGGCTGAACGATAGCAG CCGCAATATCTGTAGCGTGGAAGATCCGGTCGAAATCCCCTTGCAGGGAATCAACCAAACGGCAATCAATCCCAAAGCGG AACTGGGCTTTGGCAGAATTTTACGTGCGCTGCTGCGGCAAGATCCAGACATCATTATGATTGGTGAAATCCGCGATGCT GAAACCGCAGAAATTGCGGTAAAAGCCGCACAAACCGGCCATCTGGTCATGTCAACGTTGCATACCAACTCTGCGGTAGA AACCCTGACCCGTCTCAACCATCTGGGCATTCCCGGCTATCTGTTAGCGGCGGCGCTAAAACTCATCGTCGCACAGCGAC TTGTACGCCGATTATGCCCGCACTGTAAAACCCCGGGAGAGCCGCTACTCTCACTGCCAAATGGCATATGGCAAGGGCCA CTACACCACTGGCAAGCCAATGGTTGCAGCCACTGTTTCTCTGGCTACTATGGCCGTGTCGCGCTCTATGAATTATTGCC CATCACGCCGGTTTTTCAGGCTGCGTTAGCAGGCAATGTCAGCATTGGGACATTATCTGCCTTATCGCAAGACTCTGGTT TCCCAACGCTGCTAGCCGCGGGGCTCGAGCTAGTCAACGACGGCCTAACTTCACTTGCTGAGGTCTACCGTACTGTAGGT GATGAGTGGTCGATAAATCAGGAGGAGCCATGA Protein sequence : MTDSAFSTERTLSELQTLCRRYQALLLSIDEQTLSVAVTVSPSSEMIAALRFASNRRIMVEQWPQARMEQQLNPVNAVAE PAETYHAGTYHTNIGQQDHGDDSPVAQFIHQTLRLAVQRRASDIHFEPQPDNYRVRLRIDGVLQAISAPPPELTGRITAR LKIMGKLNIAERRLPQDGQFSLMLDQQPYSLRIATLPVQQGEKVVLRILQTHQQELALDKLGLTAKALQQVISVLSAAQG MILVTGPTGSGKTVTLYSAIRWLNDSSRNICSVEDPVEIPLQGINQTAINPKAELGFGRILRALLRQDPDIIMIGEIRDA ETAEIAVKAAQTGHLVMSTLHTNSAVETLTRLNHLGIPGYLLAAALKLIVAQRLVRRLCPHCKTPGEPLLSLPNGIWQGP LHHWQANGCSHCFSGYYGRVALYELLPITPVFQAALAGNVSIGTLSALSQDSGFPTLLAAGLELVNDGLTSLAEVYRTVG DEWSINQEEP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 8e-70 | 41 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 6e-70 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Pecwa_3763 | YP_003261105.1 | hypothetical protein | VFG2426 | Protein | 4e-81 | 46 |
| Pecwa_3763 | YP_003261105.1 | hypothetical protein | VFG0182 | Protein | 5e-74 | 44 |
| Pecwa_3763 | YP_003261105.1 | hypothetical protein | VFG0233 | Protein | 9e-74 | 44 |
| Pecwa_3763 | YP_003261105.1 | hypothetical protein | VFG1876 | Protein | 4e-76 | 43 |
| Pecwa_3763 | YP_003261105.1 | hypothetical protein | VFG2048 | Protein | 2e-71 | 42 |
