Gene Information

Name : Pecwa_3730 (Pecwa_3730)
Accession : YP_003261072.1
Strain : Pectobacterium wasabiae WPP163
Genome accession: NC_013421
Putative virulence/resistance : Virulence
Product : transporter permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 4105933 - 4106985 bp
Length : 1053 bp
Strand : +
Note : PFAM: transporter permease; KEGG: dda:Dd703_1497 transporter permease

DNA sequence :
ATGCCCGTTTATCCTTCCAGCGTAGCGAATCGCACATCATACGATCCTCGCAGGGTTGATATTCGACGCTGGCGTGGTGT
CACACTATGTTTACTGCTCATCACGCTCGGTGCCATTGCCAGCCTAATGCTGGGTGCAAAATCCATTGCACCGGAAGCCG
TGTGGATGAGCCTGACAGGCCAACTCCACAACGCAGACAGTATTATTATTCTCGACGCCCGTTTACCGCGCACGCTGGCA
GGCATCATTGCCGGGATCGCGCTCGGCGGTTCCGGTGCGATCATACAAGCGCTGACCCGTAACCCCCTCGCCGACCCAGG
TATTCTTGGCGTCAACGCGGGTGCCAGTTTCGCCATTGTTATGGGCATCATTTGGTTCGGCATCACCGACATGGCTTCCT
GGCTTGGATTTGCCTGGCTCGGCGTTTTGGTGACCAGCGTGGTGGTATGGGTTATCGGCTCGCTCAGCGGTGGGCGCGTT
AATCCCATTCGCTTAACGTTGACCGGTGTCGCCCTCAGCGCCGTTCTCACTGGCATAACGTCTTCAGTTTCGCTACTGAA
TCCCGATGCATTTGACCAAATGCGCATGTGGGAGGCGGGTACGCTGGATATTCGTTCCCTGCATAACATTACACTGGTCG
CCCCCATTGTGTTGCTGGGAGGCGGATTAGCGTTAATCATCGCCCGTGCGCTCAATGCATTAAGCATGGGTGACGACATC
GCTACCGCACTCGGCACCCGCACCATATTGATCCGTTCCGTCGCCGTGATCGCCATCATGCTGATGTGCGGTTCGGCAAC
CGCGCTGGTGGGGCCTATCGGTTTTGTTGGCTTGATGATCCCGCATATCGCCCGCTGGTGGGCAGGACCAGACCAGCGCT
GGATCGTACTTTATTCGATGCTGCTCGCTCCAGTGCTGTTATTGTGCGCCGATATTCTCGCCCGTCTACTGGCACCGAGT
GAACTACGCGTTTCGATCATAACCGCATTTATCGGCGCACCCGTACTGATTTGGCTGGTTCGCCGCCACAACATAGTAGG
AAACGAGCGATGA

Protein sequence :
MPVYPSSVANRTSYDPRRVDIRRWRGVTLCLLLITLGAIASLMLGAKSIAPEAVWMSLTGQLHNADSIIILDARLPRTLA
GIIAGIALGGSGAIIQALTRNPLADPGILGVNAGASFAIVMGIIWFGITDMASWLGFAWLGVLVTSVVVWVIGSLSGGRV
NPIRLTLTGVALSAVLTGITSSVSLLNPDAFDQMRMWEAGTLDIRSLHNITLVAPIVLLGGGLALIIARALNALSMGDDI
ATALGTRTILIRSVAVIAIMLMCGSATALVGPIGFVGLMIPHIARWWAGPDQRWIVLYSMLLAPVLLLCADILARLLAPS
ELRVSIITAFIGAPVLIWLVRRHNIVGNER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 5e-26 43
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 5e-26 43
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 5e-26 43
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 5e-26 43
SPN23F_09540 YP_002510937.1 ferric siderophore ABC transporter permease Virulence PPI-1 Protein 2e-23 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pecwa_3730 YP_003261072.1 transporter permease VFG0926 Protein 5e-53 57