Gene Information

Name : Pecwa_3717 (Pecwa_3717)
Accession : YP_003261059.1
Strain : Pectobacterium wasabiae WPP163
Genome accession: NC_013421
Putative virulence/resistance : Virulence
Product : small multidrug resistance protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2076
EC number : -
Position : 4094063 - 4094389 bp
Length : 327 bp
Strand : +
Note : PFAM: small multidrug resistance protein; KEGG: eca:ECA3771 multidrug resistance protein

DNA sequence : 
ATGTTAAACGGATTCTTATGGTTGGCGCTTTCCATTGGTTCAGAAATTACCGGCACCTCGATGATCAAAAAAACCGATGG
ATTTAAAAGACGCACGCCTTCCGTTATCGTTATTCTCGCTTACTGCCTCTGCTATTTTTCATTAACCCGCGCAATGGGCT
ATTTACCCGTGGGCGTGGCCTACTCGCTGTGGTGCGGGTTTGGCATCGTCGGCGTAACATTTATTTCGATGCTACTTTAT
AAACAAAAACCAGATTTACCTGCGGTATTTTCAATGGTTCTGATTATCAGCGGGGGCATTATCATGAACCTCTATTCAAA
TATGTAA

Protein sequence : 
MLNGFLWLALSIGSEITGTSMIKKTDGFKRRTPSVIVILAYCLCYFSLTRAMGYLPVGVAYSLWCGFGIVGVTFISMLLY
KQKPDLPAVFSMVLIISGGIIMNLYSNM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42067.1 hypothetical protein Not tested PAI II 536 Protein 6e-35 81
unnamed CAD42068.1 hypothetical protein Not tested PAI II 536 Protein 5e-17 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pecwa_3717 YP_003261059.1 small multidrug resistance protein CP004022.1.gene1549. Protein 8e-19 43
Pecwa_3717 YP_003261059.1 small multidrug resistance protein BAC0324 Protein 7e-13 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pecwa_3717 YP_003261059.1 small multidrug resistance protein VFG1586 Protein 3e-35 81
Pecwa_3717 YP_003261059.1 small multidrug resistance protein VFG1587 Protein 2e-17 44