Gene Information

Name : Pecwa_3662 (Pecwa_3662)
Accession : YP_003261004.1
Strain : Pectobacterium wasabiae WPP163
Genome accession: NC_013421
Putative virulence/resistance : Virulence
Product : single-stranded DNA-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 4033035 - 4033577 bp
Length : 543 bp
Strand : +
Note : binds to single stranded DNA and PriA helcase facilitate replication restart

DNA sequence :
ATGGCCAGCAGAGGCGTTAATAAAGTGATTCTTGTCGGGAATCTGGGTCAAGACCCGGAAGTCCGCTATATGCCGAATGG
TGGTGCAGTTGCCAACATCACGCTGGCTACGTCGGAAAGCTGGCGTGACAAGCAAACCGGTGAGCAGAAAGAGAAGACCG
AATGGCACCGTGTGGTTCTGTTCGGCAAACTGGCAGAAGTTGCAGGCGAATACCTGCGCAAAGGCTCTCAGGTTTATATC
GAAGGCGCACTGCAAACCCGTAAATGGGCCGATCAGGCTGGCGTAGAGCGCTACACCACCGAAGTCGTTGTTAACGTCGG
CGGCACCATGCAGATGCTGGGTGGACGCCAGGGCGGCGGCGCACCAGCAGGCGGTAATGCAGGTGGCGGTCAGCAGCAAG
GCGGTTGGGGTCAACCTCAGCAGCCGCAGGGTGGCAACCAATTCAGCGGCGGTGCGCAAGCTCAGCAGCGTCCGGCACAG
AACAGCGCGCCCGCACAAAGTAACGAACCGCCAATGGATTTCGACGACGACATTCCGTTCTAA

Protein sequence :
MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGALQTRKWADQAGVERYTTEVVVNVGGTMQMLGGRQGGGAPAGGNAGGGQQQGGWGQPQQPQGGNQFSGGAQAQQRPAQ
NSAPAQSNEPPMDFDDDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssB NP_458627.1 single strand binding protein Not tested SPI-7 Protein 1e-41 60
ssb NP_807839.1 single-stranded DNA-binding protein Not tested SPI-7 Protein 1e-41 60
ssb AAF14810.1 single strand binding protein Not tested SPI-7 Protein 9e-42 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pecwa_3662 YP_003261004.1 single-stranded DNA-binding protein VFG0576 Protein 1e-42 72