Gene Information

Name : Pecwa_3543 (Pecwa_3543)
Accession : YP_003260886.1
Strain : Pectobacterium wasabiae WPP163
Genome accession: NC_013421
Putative virulence/resistance : Unknown
Product : periplasmic binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0614
EC number : -
Position : 3896922 - 3897998 bp
Length : 1077 bp
Strand : -
Note : PFAM: periplasmic binding protein; KEGG: pct:PC1_3384 periplasmic binding protein

DNA sequence : 
ATGCAGAAACGTAACCTTACCATGCGGTATCGCGAGTATTTGCTCAATGCGTTAGTGCTGCTGGCGGTGAGTTTCTCCGG
TGTGCACCGGGTTCAGGCGGAAACGCCTGAACCCGCTACGCGGACGATTCACTATTACGGCGATCGCTCTGTGACGGTGC
CCGCGACGGTTGAGCGAGTTGCCACCTCATGGAATGCGCAAAATTCGATACTGGCTATGCTGGGCTATGGCGATCGTATT
GTCGGGACGACGAAGCTGGTGCGCGATATGCCGTTATTCCGCCAGTTTGTGCCGTCTATTACGCAGGCGTCGCTGGTCGC
TCATAGCGGAAACATGGGAATTAATACCGAAGCGCTGATTTCTCGCCGTGCTCAGGTCTTTTTCGTATCGGACAGCGTGC
CGGTTGCTGAAGCCGAGGCGCTGAATAAAGCGGGGATCGCTATTGTGCCGCTCCGCTATAATTCGCTGGCGGCGATGGTC
GAACGCACGCTGATTACTGGTGAGGTTCTGGGGCCGGACGCATCACGTCGGGCGCAGGATTTTGCTGCCTACTATCAGGA
TAACGTCAGGCGTGTGACGGAGGTGATCCAGAACATTCCGTCACAACAGCGTGTGAAGGTCTACCATGCGGTTGGCGATC
CGTTAACGACATCGGGACGTCCTTCACTGAATCAGGACTGGATGGATCTGGGCGGCGCGATCAACGTGGCAGAGCCGTGG
TTTAGCCGTTCTGGGGTGACAACCGCACCTGTATCGCTTGAGCAGATTTTTCAGGCCGATCCCGATGTGATTATTACGAT
GCGGGCTGAGGATGCGAAGACAATTCGCCAGGATGCGCAGTGGCAGCAGCTACGTGCGGTAAAAGAAGGGCGGGTTTATG
CCAATCCGCTGGGCATGTTTTGGTGGTGTCGGGAAACGTCGGAGCAGGCGTTGCAATTTCTTTGGCTGGCAAAAACGCTG
TATCCACAGCAGATGCAGCACATCGATATGGCAAAAGAGACGCATGATTTTTATCTGCGTTTTTACGGCATCGATTTAAC
CGCGCAGCAGGTTGAGTCAATTTTGTCACCACACTGA

Protein sequence : 
MQKRNLTMRYREYLLNALVLLAVSFSGVHRVQAETPEPATRTIHYYGDRSVTVPATVERVATSWNAQNSILAMLGYGDRI
VGTTKLVRDMPLFRQFVPSITQASLVAHSGNMGINTEALISRRAQVFFVSDSVPVAEAEALNKAGIAIVPLRYNSLAAMV
ERTLITGEVLGPDASRRAQDFAAYYQDNVRRVTEVIQNIPSQQRVKVYHAVGDPLTTSGRPSLNQDWMDLGGAINVAEPW
FSRSGVTTAPVSLEQIFQADPDVIITMRAEDAKTIRQDAQWQQLRAVKEGRVYANPLGMFWWCRETSEQALQFLWLAKTL
YPQQMQHIDMAKETHDFYLRFYGIDLTAQQVESILSPH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67368.1 iron-chelating periplasmic-binding protein Not tested PAI II CFT073 Protein 4e-71 47