|
Name : Pecwa_3533 (Pecwa_3533) Accession : YP_003260876.1 Strain : Pectobacterium wasabiae WPP163 Genome accession: NC_013421 Putative virulence/resistance : Unknown Product : ImpA family type VI secretion-associated protein Function : - COG functional category : S : Function unknown COG ID : COG3501 EC number : - Position : 3885051 - 3887228 bp Length : 2178 bp Strand : + Note : TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; PFAM: Rhs element Vgr protein; KEGG: pay:PAU_00969 hypothetical protein DNA sequence : ATGTTGAATGCAAAGAGGCCATCGGAAGGCCTTAGATTTACGTTAAATGTAGGAAATTTGCCGCCTGAAACCTTTATCGT TGTGGGATTCACGCTGAGTGAGCAGTTTTCCCTGCCTTTCGTGCTTAATCTTGAGGCAGTGAGCACTCATTCCAGCGTAG CGTTTGGCACGGTGCTGGATAGCACCGCCACACTGACCATCAGACAAGATACCGAGGTGCTACGCACTGTCAATGGTATC GTCAGTGAGATGGAACAAGGCGATGCCGGCTTACACCAAACCCGCTACCGCATCACCATACACCCCGCACTCTGGCGAGC CGGGCTGGTCAGACATTCACGTATTTTCCAGCAGCAAAGTGTTCAAGAAATACTGGAGACATTGCTCAAGAAACATCTCA TCAGTGACTATGCTTTTGCTCTACGTTACCCCCGAGCAGTGCGTGAATTCTGTGTGCAATACCAGGAAAGCGATGCCGAC TTTATCAATCGCCTGGCGGCAGAAGAAGGGATGTTCTATTTTTTCGAGCATCAACATGGCAAGCATACGCTCGTTTTTGC CGATGACTGTGCAGCACTGAATGCAGGACCGACGCTGCCCTACCGCCCTGAAAAACCAATCCGTTCAGATGAATGGGGTG TGACCACATTCCGTCGTCGGGAAAGCCTACGCCCTTCCGATGTATTGCTGAAAGACTACACCTTTAAAAAACCTCGCTGG CCAGCAGAATCTCGTGAGTATGCCCGAGATACCGAGCACCAATCAGGTCGCTACCTTCACTATGACTACCCCGGGCGCTA TAAAGGCACCGGGCCCACCGGAGAACATTTTGCACGGTGGCGTATTCAGGCCCTCCGCAACAGCGCTCATCAAGGGGAAG GCGCAACCAATTGCCCGGCACTTCAACCGGGGATCCGTTTTACTCTGGAAGACCATCCACTGGAAACGCATAACACGCGC TGGCAAATCACACACTCCACCTACATAGGAAGGCAACCCCAAGCGCTGGAAACCGAAGCCGGGGAAGAGGGAACGACGCT GATGGGGCAATTCGCCTTTATCCCACAGGATCAAACCTGGCGTCCACTTTCACTGCCCAAACCTCGTATCGATGGGGCAC AGATTGCGATTGTCACAGGCCCAGACACCGAAGAAATTTTTTGTGATGAATACGGTCGCGTCAGAGTCCGTTTTCTCTGG GATTTATCCGACAAGACAGACGACAGCAGCTCCTGCTGGGTACGAGTTTCTCACCCATGGGCGGGACAAGGCTGGGGTAT GTCAGCTATTCCGCGCATCGGCCATGAGGTGATTGTTGAGTTTCTTAACGGCGACCCCGATCAGCCCGTCATTATTGGGC GCACCTACCACGTCAGCAATCTGCCCCCAGGTAACCTGCCAGGCACGAAAACCCAGATGACGCTTCGTTCACAAACGCAT AAAGGTGACGGGTTCAATGAACTGCGATTTGAGGACGAACGAGACAGGGAGGAAATCTATATTCATGCCCAACAGGACAT GAACACTGACGTGCTACGGGATCAAACGACAACGATCAACCGGGATATGCAACTGACGGTCGATAACAACCGAACCTCAG TGGTTAAAGTGGACGATGACGAATCCGTAGGCGGATACCAGACGCTCAGCGTAACGAAAGATCAAAGCATCACGATTGAA GGGCAGCACAGCACGGTCGTCAAGAAGAGTCGTTTTCTTGAGGTGACGGACAATGATTCCCTGAAGGTTGGCAAGCACAT CTCTATCCATTCCGACAGCGGCCAAGTTTTGATTGGTAATGCTGGAGGGAGGATTGTCATTGATCCCATCGGCAATATCC GCATCGAAGGAGTAAGTATCACTCTGGCGGAACATTCTGCGGGTGGTATGCCACCGAGCCCACTATTCACCTATTCAGCG CGTTATACGTTATTCAACGAACATACCGGAACCCCCTTGATCAATGCGCCTTACACCATCAAAGGGGCCAATGGTCAGGT CGTTTCTGGTAAAACCGACGCGCAGGGCAGAACCCTGATGGTGCGAACGGAAAAAGAAGACAACCTGCAACTCGATATCC CGGAAACCCAAAAACCGGTTAAAACGCGCTATTACCAAGCCAGTAACAACGCACAGGTCGAGCGTGTAATGGAATTCAAG GAGTCACACCATGAGTAA Protein sequence : MLNAKRPSEGLRFTLNVGNLPPETFIVVGFTLSEQFSLPFVLNLEAVSTHSSVAFGTVLDSTATLTIRQDTEVLRTVNGI VSEMEQGDAGLHQTRYRITIHPALWRAGLVRHSRIFQQQSVQEILETLLKKHLISDYAFALRYPRAVREFCVQYQESDAD FINRLAAEEGMFYFFEHQHGKHTLVFADDCAALNAGPTLPYRPEKPIRSDEWGVTTFRRRESLRPSDVLLKDYTFKKPRW PAESREYARDTEHQSGRYLHYDYPGRYKGTGPTGEHFARWRIQALRNSAHQGEGATNCPALQPGIRFTLEDHPLETHNTR WQITHSTYIGRQPQALETEAGEEGTTLMGQFAFIPQDQTWRPLSLPKPRIDGAQIAIVTGPDTEEIFCDEYGRVRVRFLW DLSDKTDDSSSCWVRVSHPWAGQGWGMSAIPRIGHEVIVEFLNGDPDQPVIIGRTYHVSNLPPGNLPGTKTQMTLRSQTH KGDGFNELRFEDERDREEIYIHAQQDMNTDVLRDQTTTINRDMQLTVDNNRTSVVKVDDDESVGGYQTLSVTKDQSITIE GQHSTVVKKSRFLEVTDNDSLKVGKHISIHSDSGQVLIGNAGGRIVIDPIGNIRIEGVSITLAEHSAGGMPPSPLFTYSA RYTLFNEHTGTPLINAPYTIKGANGQVVSGKTDAQGRTLMVRTEKEDNLQLDIPETQKPVKTRYYQASNNAQVERVMEFK ESHHE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| vgrG | AAN64196.1 | VgrG | Not tested | macrophage toxin pathogenicity island | Protein | 3e-152 | 51 |
| aec15 | AAQ96709.1 | Aec15 | Not tested | AGI-1 | Protein | 4e-115 | 45 |
| aec15 | YP_851429.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 5e-115 | 45 |
