Gene Information

Name : Pecwa_3476 (Pecwa_3476)
Accession : YP_003260820.1
Strain : Pectobacterium wasabiae WPP163
Genome accession: NC_013421
Putative virulence/resistance : Unknown
Product : glycine betaine/L-proline ABC transporter ATPase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG4175
EC number : -
Position : 3820124 - 3821326 bp
Length : 1203 bp
Strand : +
Note : KEGG: eca:ECA3502 glycine betaine/L-proline transport ATP-binding protein; TIGRFAM: glycine betaine/L-proline ABC transporter ATPase; PFAM: ABC transporter; CBS domain containing protein; SMART: ATPase AAA

DNA sequence :
ATGGCAATTAAACTTGAAGTAAAGAATCTTTATAAGATATTTGGCGAGCACCCAGACAGAGCATTTAAACTGATTGATAA
AGGCCTGAGCAAAGATCAGGTATTTGAAAAAACAGGGCTTACTGTCGGGGTAAAAGATGCCAGTCTGGCCATTGAAGAAG
GCGAGATATTTGTCATCATGGGATTATCCGGTTCCGGCAAATCAACCATGGTACGCCTTCTCAATCGTCTGATCGAACCC
ACCCGTGGTCAGGTACTGATCGACGGCGAAGATATCTCCAGGATATCCGATACCGCGCTGCGCGACGTGCGTCGTAAGAA
GATCAGCATGGTGTTCCAATCCTTTGCGCTCATGCCGCATCTGAATATCCTCAACAATACCGCGTTTGGTATGGAACTGG
CTGGCGTGCCGAAAGCGGAACGCGAGCAAAAAGCGCTGGATGCATTACAGCAGGTCGGCCTTGAAGCCTACGCGGCATCT
TACCCGGATGAACTATCCGGCGGGATGCGGCAGCGTGTCGGTCTGGCGCGAGCGTTAGCGAATGACCCCGATATCCTGTT
GATGGATGAGGCATTCTCCGCGCTTGATCCGCTGATCCGTACTGAAATGCAGGATGAGTTAGTCAAACTTCAGTCCCGTC
ATCAACGCACTATCGTCTTTATCTCGCACGATTTGGATGAAGCGATGCGCATCGGTGACCGGATTGCCATCATGCACGGC
GGCGAAGTGATTCAGGTCGGTACGCCCGATGAGATCCTGAATAACCCAGCCAATGACTATGTGCGCACCTTTTTCCGCGG
TGTCGATATCAGCCACGTGTTTAGCGCCAAAGATATCGCCCGTCGTCGTCCAGTCACCTTAATCCGTAAAACTCCCGGCG
TGGGGCCACGTTCCGCGCTAAAAATCCTTCAGGACGAAGACCGTGATTATGGCTACGTGCTGGAAGGAGGGAAACGCTTC
ATTGGTATCGTGTCTATTGATTCACTGAAACAAGCGCTGAAAGAACAGTTGCCGCTGGAACAGGCGTTACTGCCCGAACC
TGCTCCCGTGCCCGCAGATATGTCACTCAACGAGCTGATTTCTCAGGTCGCACAGGCTCCCTGTGCCGTCCCTGTCGTCG
GCGAAAACCATGAGTACATTGGCATCATTTCCAAAGGAATGCTGCTACAGGCACTGGATAAGGAAGGAGTGACCAATGAG
TAA

Protein sequence :
MAIKLEVKNLYKIFGEHPDRAFKLIDKGLSKDQVFEKTGLTVGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEP
TRGQVLIDGEDISRISDTALRDVRRKKISMVFQSFALMPHLNILNNTAFGMELAGVPKAEREQKALDALQQVGLEAYAAS
YPDELSGGMRQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELVKLQSRHQRTIVFISHDLDEAMRIGDRIAIMHG
GEVIQVGTPDEILNNPANDYVRTFFRGVDISHVFSAKDIARRRPVTLIRKTPGVGPRSALKILQDEDRDYGYVLEGGKRF
IGIVSIDSLKQALKEQLPLEQALLPEPAPVPADMSLNELISQVAQAPCAVPVVGENHEYIGIISKGMLLQALDKEGVTNE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuAA YP_281521.1 glycine betaine transport ATP-binding protein Not tested Not named Protein 3e-83 50