Gene Information

Name : Pecwa_3337 (Pecwa_3337)
Accession : YP_003260682.1
Strain : Pectobacterium wasabiae WPP163
Genome accession: NC_013421
Putative virulence/resistance : Virulence
Product : DNA mismatch repair protein MutS
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0249
EC number : -
Position : 3660802 - 3663366 bp
Length : 2565 bp
Strand : +
Note : This protein performs the mismatch recognition step during the DNA repair process

DNA sequence :
ATGAATGAAGCCACAGAGAAGGACTTCACCGCCCACACGCCGATGATGCAGCAGTACTTTAGGCTAAAGGCAGAGCATCC
AGAAATCCTGCTGTTTTACCGCATGGGCGATTTTTACGAGCTGTTCTATGACGATGCCAAACGGGCTTCTCAACTGTTGG
ATATTTCGCTGACGAAACGCGGCGCTTCCGCAGGGGAACCTATCCCGATGGCGGGCGTTCCTCATCATGCTGTTGAGAAC
TACCTCGCCAGGCTGGTGCAAATGGGTGAATCCGTCGCGATCTGTGAACAGATCGGCGATCCGGCCACCAGCAAAGGTCC
GGTAGAACGTAAAGTCGTGCGTATCGTCACGCCGGGAACCATCAGCGACGAAGCCCTGTTGCAGGAAAAGCAGGATAACC
TGCTGGCAGCAATCTGGCAGGACGGTCGGGGATTCGGTTACGCCACGCTGGACATCAGCTCTGGACGCTTTCGCGTAAGT
GAACCCGCCGATAGGGAAACCATGGCGGCCGAGTTACAGCGCACCAATCCAGCAGAATTACTCTACCCAGAATCCTTTGA
GTCCATGGATTTGATCGAAAATCGTCATGGGCTCCGCCGTCGTCCACTGTGGGAATTTGAACCCGATACCGCACGCCAGC
AGCTTAACCTGCAATTTGGTACCCGCGATCTGACCGGTTTTGGCGTAGAGCAGGCGAAGCTCGCGCTACGGGCAGCAGGA
TGCCTGCTGCAATACGCGAAAGACACACAGCGTACCTCGCTGCCGCATATTCGCGGCATTACAATGGAACGCCAACAGGA
CGGCATCATCATGGATGCGGCCACACGCCGTAATCTTGAACTGACGCAAAACCTGTCAGGCGGCGTAGAAAATACGCTGG
CTGCCGTACTGGACTGCACGGTGACGGCAATGGGCAGCCGGATGCTGAAGCGCTGGATTCACATGCCTAGCCGTGATATT
GACGCGCTCAAACAACGCCAACAGGCCATCAGCGCGTTACAAGAAATCACTCCCGATCTACAGCCCTACTTGCGGCAGGT
CGGCGATCTGGAACGTATTCTGGCACGCCTTGCTTTACGCACGGCACGCCCACGCGATCTCGCACGTATGCGCCATGCTT
TCCAGCAGTTTCCCGCTATTCGCGAACAGCTTGCGCCATTGGAGGCCGATTCCGTTCGCCGTTTGGTCAGCCAGATTGGT
CAATTTGACGAACTGCGTGATTTGCTGGAACGCGCCGTTGTCGAAGCACCGCCTGTGCTGGTACGCGACGGCGGGGTCAT
CGCACCGGGCTACCATGCAGAATTGGATGAGTGGCGGGCGTTAGCTGACGGTGCCAGCGATTATCTGGACCGTCTGGAAA
TTCGCGAACGTGAAAAACTGGGGCTTGATACGCTGAAAGTCGGCTTCAATGGTGTGCACGGCTATTACATTCAAGTTAGC
CGAGGCCAGAGCCATCTGGTGCCGATCCACTACGTCCGTCGCCAGACGCTAAAAAATGCCGAACGCTATATCATTCCTGA
ACTAAAAGAATACGAAGACAAGGTTCTGACCTCGAAGGGTAAGGCGCTGGCGCTGGAAAAAGCACTCTACGATGAGCTTT
TCGATCTATTGCTGCCTCATCTGGCAGAGCTTCAGCAGAGTGCAACAGCGTTAGCCGAGCTGGATGTACTGGCGAACCTA
GCCGAGCGTGCCGATACGTTGAATTACATCTGCCCAATGCTGAGTGATAAACCCGGTATCAAAATCACGGGCGGTCGTCA
CCCTGTCGTCGAACAGGTGCTGCGTGAGCCGTTTATTTCGAACCCCCTGTCGCTATCGCCACAGCGTCGTATGCTGATCA
TTACCGGCCCCAACATGGGAGGTAAAAGTACCTATATGCGTCAGGCTGCGCTGATTGTATTGATGGCGCATATCGGCTGC
TTTGTGCCTGCGGATCTGGCAGTCATTGGCCCCGTCGATCGCATTTTCACCCGCGTAGGTGCCGCGGACGATCTGGCATC
TGGCCGTTCGACGTTCATGGTAGAAATGACGGAAACGGCCAATATTCTACACAACGCCACGGAAAACAGTCTGGTGCTGA
TGGACGAAATCGGCCGCGGCACCTCAACCTATGACGGTTTGTCGCTAGCGTGGGCCTGCGCCGAAAATCTGGCGAACCGC
ATCAAAGCCATGACGTTGTTTGCAACGCACTACTTTGAGCTGACCACCCTGCCGGAAAAAATGGAAGGGGTGGTAAATGT
CCATTTGGATGCGCGCGAGCACGGCGATACCATCGCCTTCATGCACAGCGTACAAGACGGTGCCGCCAGCAAAAGTTATG
GCCTTGCCGTTGCCGCACTCGCGGGTGTACCGAAAGACGTGATTAAACGTGCACGTCAGAAGCTGAAGGAACTGGAAACG
TTATCGAATAATGCGTCATCCAGCCATATCGATGGCGCGCAACTGGCGCTGCTGAACGCTGATGAACCGTCACCAGCGAT
GGAAGCACTGGAAGCCATCGATCCCGATGCGCTCACGCCACGTCAGGCGCTGGATTGGCTTTATCAGCTAAAGAAAATGC
TCTAA

Protein sequence :
MNEATEKDFTAHTPMMQQYFRLKAEHPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGEPIPMAGVPHHAVEN
YLARLVQMGESVAICEQIGDPATSKGPVERKVVRIVTPGTISDEALLQEKQDNLLAAIWQDGRGFGYATLDISSGRFRVS
EPADRETMAAELQRTNPAELLYPESFESMDLIENRHGLRRRPLWEFEPDTARQQLNLQFGTRDLTGFGVEQAKLALRAAG
CLLQYAKDTQRTSLPHIRGITMERQQDGIIMDAATRRNLELTQNLSGGVENTLAAVLDCTVTAMGSRMLKRWIHMPSRDI
DALKQRQQAISALQEITPDLQPYLRQVGDLERILARLALRTARPRDLARMRHAFQQFPAIREQLAPLEADSVRRLVSQIG
QFDELRDLLERAVVEAPPVLVRDGGVIAPGYHAELDEWRALADGASDYLDRLEIREREKLGLDTLKVGFNGVHGYYIQVS
RGQSHLVPIHYVRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKALYDELFDLLLPHLAELQQSATALAELDVLANL
AERADTLNYICPMLSDKPGIKITGGRHPVVEQVLREPFISNPLSLSPQRRMLIITGPNMGGKSTYMRQAALIVLMAHIGC
FVPADLAVIGPVDRIFTRVGAADDLASGRSTFMVEMTETANILHNATENSLVLMDEIGRGTSTYDGLSLAWACAENLANR
IKAMTLFATHYFELTTLPEKMEGVVNVHLDAREHGDTIAFMHSVQDGAASKSYGLAVAALAGVPKDVIKRARQKLKELET
LSNNASSSHIDGAQLALLNADEPSPAMEALEAIDPDALTPRQALDWLYQLKKML

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 0.0 79

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pecwa_3337 YP_003260682.1 DNA mismatch repair protein MutS VFG0562 Protein 0.0 84