Gene Information

Name : Pecwa_3113 (Pecwa_3113)
Accession : YP_003260462.1
Strain : Pectobacterium wasabiae WPP163
Genome accession: NC_013421
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3272
EC number : -
Position : 3392659 - 3393618 bp
Length : 960 bp
Strand : -
Note : PFAM: protein of unknown function DUF1722; protein of unknown function DUF523; KEGG: pct:PC1_1223 hypothetical protein

DNA sequence :
ATGACGCTCGAACTCATCCCTGTTGGTATCAGCGCCTGTCTGCTCGGTAATCCCGTGCGGTTTGATGGTGGACACAAGCG
TCTGACGTTTGCCGCTGAACAACTGGCGCCCTATTTTCGTTTTGAGCCGGTCTGCCCGGAAATGGCGATTGGTTTACCGG
TGCCGCGTCCTGCGCTCAGGCTGGTGCGCGAAGGGGAGAGCCACATCACACTACGCGCCAGTAATGGCTCGCCTCTGGAT
GTCACCCAGCAAATGACGGTGTTTTCCGCTGACAAAGTGAGCGGACTTCAGCACTTATGCGGGTATATCGTCTGCGCTAA
ATCACCAAGTTGTGGCATGGAGCGCGTGAAGGTTTACGATGAAGCGCAAAAGGATGCGCGTAAAAGCGGAATCGGCCTGT
TTACGCAGGAGTTGATGCGGCAAATGCCCTGGTTGCCGGTTGAGGAAGATGGACGCCTGCAAGATCTTGGCTTGCGGGAA
AATTTCATTGAACGCGTTTATGCGCTGCACGAACTGAATCAGCTATGGCAAAACGGGCTGAGCCGTGGCGCGCTTATTGC
CTTTCATAGCCGCTATAAATTACTGCTGTTGGCGCACTCCCAACCGGAATACCGCGAGCTGGGGCCGTTTGTTGCGGGGA
TCGATAAGTGGGAATCGCTGGAAGACTATATTGTTGAATACCGGATAAGGTTGATGAAACTGCTATCGACGCCAGCGACG
CGACGCAATCACACCAATGTGCTGATGCATGTGCAGGGGTACTTCCGACGCCAGCTAAATTCTCAACAGCGACAGGAACT
GGCGCAGCTTATCGATCGCTATCGACAGGGTTTGCAGCCGCTATTGGCACCTATCACATTGCTAAAACATTATATGGCGG
AATACCCCGATGCGTATCTGGCCCAGCAGCGTTACTTTGAGCCGTACCCGGAAGCATTGCGCCTGCGTTATGGACACTAA

Protein sequence :
MTLELIPVGISACLLGNPVRFDGGHKRLTFAAEQLAPYFRFEPVCPEMAIGLPVPRPALRLVREGESHITLRASNGSPLD
VTQQMTVFSADKVSGLQHLCGYIVCAKSPSCGMERVKVYDEAQKDARKSGIGLFTQELMRQMPWLPVEEDGRLQDLGLRE
NFIERVYALHELNQLWQNGLSRGALIAFHSRYKLLLLAHSQPEYRELGPFVAGIDKWESLEDYIVEYRIRLMKLLSTPAT
RRNHTNVLMHVQGYFRRQLNSQQRQELAQLIDRYRQGLQPLLAPITLLKHYMAEYPDAYLAQQRYFEPYPEALRLRYGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 2e-94 60
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 2e-94 60
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 4e-94 60
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 2e-94 60
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 2e-94 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pecwa_3113 YP_003260462.1 hypothetical protein VFG0490 Protein 9e-95 60