Gene Information

Name : Pecwa_2937 (Pecwa_2937)
Accession : YP_003260293.1
Strain : Pectobacterium wasabiae WPP163
Genome accession: NC_013421
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 3197484 - 3198338 bp
Length : 855 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: pct:PC1_1526 ABC transporter

DNA sequence : 
ATGATGCGAGAGAATGCGCTGCCAATACACGTATATCCGACTCACGGCGCGGCAATTGCCAGCCACTCGCTGACGCTACG
TTACGATAAGCAGATCGTGATTGACGCACTGGATATTGCGCTGCCAGCCCAGAAAATTTCAGTGCTGGTGGGGAGTAACG
GCTGCGGCAAGAGTACATTATTGAAGTCATTCGCCCGCCTGCTGAAACCGACAAGCGGGACGATTATTGTCAACGGGGCG
GATATCCATCGGCAATCTACCGTTGAAGTGGCGAAATCGCTGGCGATTTTGCCGCAAACGCCGACCGCGCCGGAAGGGCT
GACGGTGTATCAATTGGTGAAGATGGGGCGTTATCCGCACCAGTCGTGGCTAAAGCAGTGGTCGACAACGGACGAAGAAA
AAGTGATTCAGGCGTTGCACAGCACTGGCGTGTTGGCATTAAAGGATCGCGCGGTGGATTCGCTGTCCGGCGGGCAGCGG
CAGCGTGTCTGGATCGCGATGACGCTGGCGCAGGATACCGATATCGTGTTGCTGGATGAGCCGACGACCTATCTCGATCT
GGCGCATCAGATGGAGGTACTGGATTTGCTACGGGAACTGAACGCTCAGCAGCAGAAAACCATCGTCATGGTGCTGCACG
ATCTGAATTTGGCGTGCCGCTACGCGCATCACATGGTGGCCGTGCATAACCGGACGGTGTTTGCGCAGGGCAATCCACGC
GACATTCTCACCGAAGCTACGGTAAAAACGGTGTTTAACCTGAACTGTCGCATCATCGACGATCCATTTTTCGGTACGCC
GTTGTGCATTCCATTTGGGCGCGAGGCGGTGGAGGCTGCGACTGATGTCGGCTAA

Protein sequence : 
MMRENALPIHVYPTHGAAIASHSLTLRYDKQIVIDALDIALPAQKISVLVGSNGCGKSTLLKSFARLLKPTSGTIIVNGA
DIHRQSTVEVAKSLAILPQTPTAPEGLTVYQLVKMGRYPHQSWLKQWSTTDEEKVIQALHSTGVLALKDRAVDSLSGGQR
QRVWIAMTLAQDTDIVLLDEPTTYLDLAHQMEVLDLLRELNAQQQKTIVMVLHDLNLACRYAHHMVAVHNRTVFAQGNPR
DILTEATVKTVFNLNCRIIDDPFFGTPLCIPFGREAVEAATDVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 2e-56 47
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 2e-56 47
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 5e-61 46
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-57 45
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-57 45
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 9e-58 45
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 9e-58 45
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-50 44
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 5e-47 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pecwa_2937 YP_003260293.1 ABC transporter BAC0164 Protein 7e-51 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pecwa_2937 YP_003260293.1 ABC transporter VFG0925 Protein 9e-63 47
Pecwa_2937 YP_003260293.1 ABC transporter VFG1042 Protein 6e-51 44