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Name : Pecwa_0286 (Pecwa_0286) Accession : YP_003257746.1 Strain : Pectobacterium wasabiae WPP163 Genome accession: NC_013421 Putative virulence/resistance : Virulence Product : D-arabinose 5-phosphate isomerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : 5.3.1.13 Position : 318869 - 319906 bp Length : 1038 bp Strand : - Note : KEGG: eca:ECA0293 D-arabinose 5-phosphate isomerase; TIGRFAM: KpsF/GutQ family protein; PFAM: sugar isomerase (SIS); CBS domain containing protein DNA sequence : ATGTCACAGTTTGAACAAGACGCTCACCTAAAACAGCAGTCTGACCGTGCACTATCCGAACATAGACTACAACCCGATTT CGATTTCCAGCAGGCGGGCAAGCAGGTACTGAGTATCGAACGCGATGGGCTTGCGCAATTAGATCAGTATATTGACGACA ATTTTACCCTCGCCTGCAAAAAGATCTTTAACTGCCAGGGCAAAGTGGTGGTGATGGGAATGGGCAAATCCGGTCACATC GGTTGCAAGATTGCCGCAACCTTCGCCAGCACGGGTACACCTGCTTTTTTCGTTCATCCGGGCGAAGCCAGCCACGGTGA CCTCGGCATGGTGACGCCGCACGATATCGTGATCGCGATTTCCAATTCTGGCGAATCCCATGAAATCCTGTCGCTGATCC CTGTTCTGAAACGCCAGAAAGTGTTCCTGATCTGCATGACCAGCGCACCAGAAAGTACGATGGGTAAAGCGGCGGATATA CACCTGTGCGTCCACGTTCCGCAGGAAGCCTGCCCGCTCGGTCTGGCACCCACCACCAGCACCACCGCAACACTGGTCAT GGGCGACGCACTCGCCGTGGCTTTGCTACAGGCGCGCGGTTTTACTGCCGAAGATTTCGCCCTATCTCACCCCGGTGGCG CACTTGGCCGCAAACTTTTACTGCGTATCAGCGATATCATGCATTCGGGCGACGAGATCCCCCATGTCTCACACGATGCC TCACTGCGTGATGCGCTGGTGGAAATTACGCGCAAAAATCTGGGTATGACGGTAATCTGCGAAGCGGATATGAAAATTCA GGGTATCTTTACCGATGGTGACCTGCGCCGCATCTTCGACATGAATATTGACTTGAACAGCGCGCGCATTGCTGATGTGA TGACCGCGGGCGGCATCCGGGTCGCGCCGAACATGCTGGCGGTAGATGCACTTAACCTGATGCAGTCGCGCCACATCACC TCAGTGCTGGTGGCAGAAAACGATCGTCTGGTCGGTATTGTTCATATGCACGATATGTTGCGGGCTGGCGTGGTTTAA Protein sequence : MSQFEQDAHLKQQSDRALSEHRLQPDFDFQQAGKQVLSIERDGLAQLDQYIDDNFTLACKKIFNCQGKVVVMGMGKSGHI GCKIAATFASTGTPAFFVHPGEASHGDLGMVTPHDIVIAISNSGESHEILSLIPVLKRQKVFLICMTSAPESTMGKAADI HLCVHVPQEACPLGLAPTTSTTATLVMGDALAVALLQARGFTAEDFALSHPGGALGRKLLLRISDIMHSGDEIPHVSHDA SLRDALVEITRKNLGMTVICEADMKIQGIFTDGDLRRIFDMNIDLNSARIADVMTAGGIRVAPNMLAVDALNLMQSRHIT SVLVAENDRLVGIVHMHDMLRAGVV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 4e-51 | 43 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 3e-51 | 43 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 9e-51 | 43 |
