Gene Information

Name : Pecwa_0270 (Pecwa_0270)
Accession : YP_003257730.1
Strain : Pectobacterium wasabiae WPP163
Genome accession: NC_013421
Putative virulence/resistance : Unknown
Product : DNA-binding transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0583
EC number : -
Position : 305345 - 306289 bp
Length : 945 bp
Strand : -
Note : PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eca:ECA0276 DNA-binding transcriptional regulator

DNA sequence :
ATGGAAAGACTAAAAAGTATGTCAGTGTTTGCTCGCGTGGTGGAATGTGGTTCTTTTACCGCCGCCGCCCGCCAGTTGCA
GATGAGCGTATCCGCCGTCAGCCAGACCGTCAGCAAGCTTGAAAATGAACTACAAGTTAAGCTGCTGAATCGCAGCACGC
GCAGCATTGGGCTGACGGAAGCGGGAAAAATTTACTATCACGGCTGTCGCCGCATGCTGCATGAAGCTCATGAAGTACAC
GAACAACTTTATGCCTTTAACAACACGCCGATCGGCACGCTGCGCATCGGCAGTTCTTCCACCATGGCGCAGCATGTGTT
GTCCACCATGACCGCCAAGATGCTAAAAGAATATCCCGGTTTGTCCGTCAATCTGGTTGCTGGCATCCCCGCTCCCGACC
TGATCGCCAACGGCTTAGATATCGTTATCCGTGTCGGCCCGCTGCAGGATTCCGGCCTGTTCTCGACGCGTCTGGGTTCA
ATGCCGATGGTGGTCTGTGCCGCGAAAAGTTATCTGGCGCAACACGGTACGCCGGAGAAACCGACAGATATGGGGAATTT
TTCCTGGCTGGAATACAGTGTACGACTCGATAGCGAATTCGAACTAATCGCACCGGAAGGCATTTCGACCCGCATCACAC
CACAGGGGCGCTTTGTCACTAACGACCCGCAAACGCTGGTGCGCTGGCTCAAGACAGGGGCAGGTATCGCGTATGTTCCG
CTCATGTGGATCGTGGACGAAATCAATCGCGGCGAAATAGAGATTCTGTTCAACCGCTACCACTCCGACCCGCGTCCGGT
TTACGCGCTTTACACCCGTAAGGACAATCTGCCGCTAAAAGTGCAGGTCTGCATTAACTACATGACGGAATACTTCAAAA
ACGTCGCTCTGATCTATCAAGGTTATAGTGAGAATGATAGCGAGGACAAAAAACCGCGCTCATAA

Protein sequence :
MERLKSMSVFARVVECGSFTAAARQLQMSVSAVSQTVSKLENELQVKLLNRSTRSIGLTEAGKIYYHGCRRMLHEAHEVH
EQLYAFNNTPIGTLRIGSSSTMAQHVLSTMTAKMLKEYPGLSVNLVAGIPAPDLIANGLDIVIRVGPLQDSGLFSTRLGS
MPMVVCAAKSYLAQHGTPEKPTDMGNFSWLEYSVRLDSEFELIAPEGISTRITPQGRFVTNDPQTLVRWLKTGAGIAYVP
LMWIVDEINRGEIEILFNRYHSDPRPVYALYTRKDNLPLKVQVCINYMTEYFKNVALIYQGYSENDSEDKKPRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tcaR1 CAI77370.1 putative lysR-family transcriptional regulator Not tested tc-PAIYe Protein 3e-129 84