|
Name : Pecwa_2519 (Pecwa_2519) Accession : YP_003259886.1 Strain : Pectobacterium wasabiae WPP163 Genome accession: NC_013421 Putative virulence/resistance : Unknown Product : transposase IS200-family protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1943 EC number : - Position : 2730157 - 2730615 bp Length : 459 bp Strand : - Note : PFAM: transposase IS200-family protein; KEGG: ypk:y1204 transposase DNA sequence : ATGAGGGACGAAAAGAGCTTAGCGCACACCCGATGGAACTGTAAATATCACATAGTTTTTGCGCCGAAGTATCGAAGGCA GGTGTTCTACGGGGAAAAACGCAAAGCGATAGGCAGTCTTTTAAGAAAGCTGTGCGAATGGAAAAACGTGAATATTCTGG AAGCGGAATGCTGTGTGGATCACATCCATATGCTTCTGGAAATCCCGCCGAAGATGAGTGTCTCGGGATTTATGGGGTAC CTAAAGGGAAAGAGCAGCCTGATGCTTTATGAGCAGTTTGGCGATTTGAAGTACAAATACCGTAACAGGGAATTTTGGTG CCGAGGGTATTACGTTGATACAGTAGGGAAAAACACGGTCAGGATACAAGAATACATAAAGCACCAGTTGGAAGAAGATA AAATGGGAGAGCAATTCTCGATCCCGGTAGCCCGTTTACGGGCCGTAAGTAATCCATAG Protein sequence : MRDEKSLAHTRWNCKYHIVFAPKYRRQVFYGEKRKAIGSLLRKLCEWKNVNILEAECCVDHIHMLLEIPPKMSVSGFMGY LKGKSSLMLYEQFGDLKYKYRNREFWCRGYYVDTVGKNTVRIQEYIKHQLEEDKMGEQFSIPVARLRAVSNP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpA | NP_455584.1 | transposase for insertion sequence element is200 | Not tested | SPI-5 | Protein | 1e-61 | 91 |
| CPR_0382 | YP_697711.1 | IS1469, transposase | Not tested | Not named | Protein | 2e-43 | 65 |
| SP_1064 | NP_345538.1 | IS200 family transposase | Not tested | PPI-1 | Protein | 3e-45 | 64 |
| EF0615 | NP_814372.1 | IS200 family transposase | Not tested | Not named | Protein | 2e-32 | 55 |
| ef0123 | AAM75324.1 | EF0123 | Not tested | Not named | Protein | 2e-32 | 55 |
