Gene Information

Name : Pecwa_2451 (Pecwa_2451)
Accession : YP_003259819.1
Strain : Pectobacterium wasabiae WPP163
Genome accession: NC_013421
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3519
EC number : -
Position : 2655315 - 2657189 bp
Length : 1875 bp
Strand : -
Note : TIGRFAM: type VI hypothetical protein, VC_A0110 family; PFAM: protein of unknown function DUF879; KEGG: eta:ETA_06310 hypothetical protein

DNA sequence :
ATGGACAGCAAACTGCTCGATTACTACAACCGTGAGCTCGCTTATTTGCATGAAATGGGCGCGGAGTTTGCCGCGCACTA
TCCCAAAGTGGCAGGGCGTCTGGGCATGCGAGGGATCGATGTCGCCGACCCTTACGTTGAACGAATGCTGGAAGGTTTTG
CCTTCCTCACTTCGCGTGTTCAACTGAAAATGGACGCTGAATTTCCGCGTTTTTCGCAGCGTATGCTGGAAATGATCGCG
CCTGGTTACTTATCGCCAACGCCGTCAATGGCCATTGCCAAACTGACGCCAGATACGCAAAAAGGCGACATCAGCAATGG
TTTCCTCGTGCCACGCGGCACCATGATGGAAAACCAAAATCTGAAAAAAAGCGGCGTCACCTGTAGCTACACCACGGCAC
ATGACGTGATGCTGCAACCGTTATGCATCAGCGATGTCTCGCTCGGCGGTGTACCGGCTGATATCCCTTTGGGTGAACTA
AAACTGAGCGGCCTCGGTGCCGCCAGTGCATTGCGGATCCGTATTGAATGTGAAGGTGTTCCGTCGTTAGACCAGCTTAA
GCTGGATGATGTAATACTGTACCTGAGTGGCCCGGATATCCAGGCGCTGAAGCTGTTGGAATTATTGATGCAGCATCGTG
TCGGCATCCTGTTGCAATCCGTGGAAGAAAAGCCGCTGCGCCGGGTGTTAAGCGATGATGCGCTACAGCAGGAAGGGTTT
GCACCAGAGCAGGCGCTGCTGCCAGACGACCTGCGTAACTTCGATGGCTATCGCCTGTTGCAGGAGTATTTTGCTTTTCC
TGCCCGTTTCCAGTTCATCAGTTTAAGGCAGTTAGCGCCGTTCATTCGCTGCTGTGGCAACGCCCGAATCTTTGAAATTA
TTATCTTGCTGGATAAAGCCGACAGCGCACTAGAGAGTGTGGTGGATGCCAGTCATCTGGCATTACATTGCACCCCCGTC
ATTAATCTGTTCCCGAAAACCGCTGAACGTTTAAAGATCAGCGACAGCCAACACGAGTACCACTTGGTGGTCGATAATAT
CCGTCCACTGGATTATGAAGTGCATTCGGTTCAGCGACTATTTGCCACGGTGGAAGGGAAACGAGAGGAGCAGATTTTCC
GCTCTTTCTGGAGCACCTTCAGTGGCGATGGCAGCGATTACGGTGCCTATTTTTCGCTGCGGCGCGAGCAGCGCACGCTG
TCCGAACAGGCGCAGCGCTGTGGCACACGCACTGGCTACATCGGTTCGGAAGTTTTCCTGTCGCTGGTCGATGAGCACCA
TACGCCGTGGCGTGATGACCTGCGTTATCTATCGGCAGACGTGATGTGTACCAGTCGTGATTTACCACTCATGCTATTAC
AGCAGGATCAGGGCAACTTCGTGATGCCAGATTCGATCCCGGTGGGGCCGTTGACGTTGTGCAAAGGCCCAACGCCACCG
CGTCCGGCGCTAGCAGAAGGCCTCTCATCCTGGCGGCTGATTAGCCATCTGCAAATGAATTACCTCAGTCTGATGGACTG
CGCCGGCGGTGAAGGCGCTGCAGCATTGCGCCAACTACTTAGCCTGTACGCCAACTTAGCCGATGCGCCAGTGTCACGCC
AAATAGAAGCCATCCGCCATTGCCAGCTCAGCACCGTCAACCGCCGTGTACCTGAACCGGGGCCCGTAGTGTTTGCACGG
GGTGTCAGCATCACGCTGGAGGTCGATGAACAGGCGTTTTCCGGTGCAAGCCCGTGGCTATTTGGCAGCGTCTTGGAACG
CGTTTTCTCTCGACTGGTTGCGCTAAACAGTTTCACTGAATTCACTCTGAACAGTCAGCAGCGTGGCGAAGTCGGTTACT
GGCCGCCTCGCATGGGCAAGAAGGCGTTGATATGA

Protein sequence :
MDSKLLDYYNRELAYLHEMGAEFAAHYPKVAGRLGMRGIDVADPYVERMLEGFAFLTSRVQLKMDAEFPRFSQRMLEMIA
PGYLSPTPSMAIAKLTPDTQKGDISNGFLVPRGTMMENQNLKKSGVTCSYTTAHDVMLQPLCISDVSLGGVPADIPLGEL
KLSGLGAASALRIRIECEGVPSLDQLKLDDVILYLSGPDIQALKLLELLMQHRVGILLQSVEEKPLRRVLSDDALQQEGF
APEQALLPDDLRNFDGYRLLQEYFAFPARFQFISLRQLAPFIRCCGNARIFEIIILLDKADSALESVVDASHLALHCTPV
INLFPKTAERLKISDSQHEYHLVVDNIRPLDYEVHSVQRLFATVEGKREEQIFRSFWSTFSGDGSDYGAYFSLRREQRTL
SEQAQRCGTRTGYIGSEVFLSLVDEHHTPWRDDLRYLSADVMCTSRDLPLMLLQQDQGNFVMPDSIPVGPLTLCKGPTPP
RPALAEGLSSWRLISHLQMNYLSLMDCAGGEGAAALRQLLSLYANLADAPVSRQIEAIRHCQLSTVNRRVPEPGPVVFAR
GVSITLEVDEQAFSGASPWLFGSVLERVFSRLVALNSFTEFTLNSQQRGEVGYWPPRMGKKALI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0289 NP_454871.1 hypothetical protein Not tested SPI-6 Protein 3e-119 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pecwa_2451 YP_003259819.1 hypothetical protein VFG2074 Protein 1e-126 45