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Name : Pecwa_2250 (Pecwa_2250) Accession : YP_003259627.1 Strain : Pectobacterium wasabiae WPP163 Genome accession: NC_013421 Putative virulence/resistance : Virulence Product : PTS system ascorbate-specific transporter subunit IIC Function : - COG functional category : S : Function unknown COG ID : COG3037 EC number : - Position : 2437406 - 2438743 bp Length : 1338 bp Strand : - Note : membrane component; functions with enzymes IIB (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate; sgaTBA are regulated by yifQ as well as Crp and Fnr DNA sequence : ATGAACACCGTTATCAATTTCATTGTGAAAGACTTATTAGGCCAGGCATCCATATTAATCGCGCTGATCGCCATGATTGG GTTGATTTTACAGAAGAAATCGGTAGGGAAAATTGCAGAGGGGACATTCAAGACACTGCTTGGTTTCCTCATCATGATGG CAGGGATTAACATCATCGTCGATGCTCTGACGTATTTGAACAGTATCTTTACCCACGGTTTCGGCATGAAAGGCTACATC ACGGACGTCGCCGCCATCGCCGGATTGGCAAACCGCGAACTTGGGTCAGAAGTCGCACTGACGCTGATGGTGATCTTTGC CGTCAACATCCTGATTGCGCGGATTACCCCCTTTAAATATATCTTCCTGACGGGGCAGGCTCTGCTGTGGATGGCAACAA TCGGTACGGTGATCGGCTATAAGTCGGGCTTGACCGGCGCGACGTTGATCCTCACCGGCGGTATATTTGGCGGTATTATG GCCGTGCTGATGCCTGCGCTGGCGCAGCCGATTGTCCGTAAAATCACAAATTCCGATGATGTTGCACTGGGGCATTTTTG TACCATCGGGTATTTGGTGCAGGCCGCCGTCGCTCGGTTAGTCGGTAAAAACTCTAAATCTACAGAAGATTTAACGCTGC CTGATAACTTCAAATTCTTGCAGGACACTTACCTGTCGATGGCCGTCGTTATGGTGCCGATGTACCTCATCCCCGCCTTG GCTGCGGGGCCCGCCTACATCGCGCAATATGCCAACGGCGTCAACTATCTGATGTATTCCTTCATGCAGTCCATGCAGTT TGTGGCGGGCGTTTTCGTTCTCTACAGCGGTGTACGGCTGCTGCTTAATGAGCTGGTGCCTGCATTTCGAGGTATCGCCA TGCGTCTGGTGCCTAACGCTAAACCCGCGTTGGATTGCCCGGTACTCTTCCCCTATGCACCCAACGCCGTGATTGTTGGC TTCCTCGCCACCACCGTTGGTTCCATTCTGGGGATGCTGATCTTCCCAATGTTTGGATTGGCGATGATTTTGCCAGGTTT ATTGACCAACTTCTTTGCAGGCGGAACGGCGGGTATTTTCGGTAACGCCATGGGGGGACGGCGTGGCGCAATTATCGGTG GTGTGGTTCATGGCCTTTTTATTACCTTATTGCCTGCCATTCTGGTGCCATTACTGGAAGTCTTCGGATTTACCGGCGTG ACCTTCAGTGACTCTGATGTCATTGGTACCGGGCTAATATTAGGACACGCCTTCCAGCAAGACTGGTTATTTGTCGCTGC CTTTATCGCGTTCGTGGCAGTCATTGCCTTTATTGCAAATCGTAAACTGTCGCAATAA Protein sequence : MNTVINFIVKDLLGQASILIALIAMIGLILQKKSVGKIAEGTFKTLLGFLIMMAGINIIVDALTYLNSIFTHGFGMKGYI TDVAAIAGLANRELGSEVALTLMVIFAVNILIARITPFKYIFLTGQALLWMATIGTVIGYKSGLTGATLILTGGIFGGIM AVLMPALAQPIVRKITNSDDVALGHFCTIGYLVQAAVARLVGKNSKSTEDLTLPDNFKFLQDTYLSMAVVMVPMYLIPAL AAGPAYIAQYANGVNYLMYSFMQSMQFVAGVFVLYSGVRLLLNELVPAFRGIAMRLVPNAKPALDCPVLFPYAPNAVIVG FLATTVGSILGMLIFPMFGLAMILPGLLTNFFAGGTAGIFGNAMGGRRGAIIGGVVHGLFITLLPAILVPLLEVFGFTGV TFSDSDVIGTGLILGHAFQQDWLFVAAFIAFVAVIAFIANRKLSQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAC39291.1 | hypothetical protein | Not tested | LPA | Protein | 1e-65 | 45 |
| vpeC | ADD91725.1 | putative PTS system-specific IIC component VpeC | Virulence | PAI-I AL862 | Protein | 1e-65 | 45 |
| ORF8 | AAK27335.1 | unknown | Not tested | PAI-I AL862 | Protein | 1e-65 | 45 |
