Gene Information

Name : Pecwa_2210 (Pecwa_2210)
Accession : YP_003259587.1
Strain : Pectobacterium wasabiae WPP163
Genome accession: NC_013421
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 2401822 - 2402712 bp
Length : 891 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: eca:ECA2393 chelated iron transporter membrane protein

DNA sequence : 
ATGAGTCGTGATCGAACAAAGCAGTCACTAGAAGTCAATGATGTTTCGGTTACTTACAGCAACGGACATCAGGCTATTCG
CCACGCCTCTTTTTCTCTGGCTGGCGGTACGATTTGCGCTCTGGTCGGCGTAAATGGTAGCGGAAAATCCACGTTATTCA
AAAGCATCATGGGGTTAGTCAAGCCAACCTCAGGGCAGGTACTGCTCAATCAGCACCCCATCTACCAGGCGTTGAAACAG
AATCTGGTTGCCTACGTTCCACAAACAGAGGATGTGGACTGGAATTTTCCCGTTCTGGTTGCCGACGTGGTCATGATGGG
CCGCTACGGGCGGATGAACTTCCTGCGTATCCCCAGTAAACAAGACCGCGCGATTGTAGCCGAATCATTGGAGCGCGTCG
GGCTGTCGACGCTGCAACATCGCCAAATTGGGGAACTGTCCGGAGGCCAGAAAAAGCGCGTCTTTCTGGCCCGTGCGTTA
GCGCAACAAGGCAGCGTTCTGCTGTTGGATGAGCCTTTTACGGGGGTCGACGTCAAAACGGAGAATGCCATCATCGAGCT
ACTTCGCACCTTGCGCGACGAAGGGCATTTGATTCTGGTAGCAACCCACAACCTCGGCAGCGTTCCCGAGTTTTGCGACA
ATGTTATTTTGGTCAATCGCACCGTGTTAGCCGCTGGGCCGACACACAGTACCTTTACCCAAAGTAATTTGGAGAAAACG
TTCGGGGGCGTCCTGCGACACATCAACCTCGGGGGAGCACATCTTCACGACGACGACGACGTTCGCTCGGTGACGGTATT
AACCGACGATGAACGTCCTGCGGTGTTCTATGGTTCGACTAAAAGCGACCCTCCTGCGTCACGCACGATACCGGAGGAGA
AGAAACCCTGA

Protein sequence : 
MSRDRTKQSLEVNDVSVTYSNGHQAIRHASFSLAGGTICALVGVNGSGKSTLFKSIMGLVKPTSGQVLLNQHPIYQALKQ
NLVAYVPQTEDVDWNFPVLVADVVMMGRYGRMNFLRIPSKQDRAIVAESLERVGLSTLQHRQIGELSGGQKKRVFLARAL
AQQGSVLLLDEPFTGVDVKTENAIIELLRTLRDEGHLILVATHNLGSVPEFCDNVILVNRTVLAAGPTHSTFTQSNLEKT
FGGVLRHINLGGAHLHDDDDVRSVTVLTDDERPAVFYGSTKSDPPASRTIPEEKKP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 1e-81 62
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 1e-81 62
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-81 61
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 7e-82 61
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 5e-82 61

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pecwa_2210 YP_003259587.1 ABC transporter BAC0440 Protein 8e-112 78
Pecwa_2210 YP_003259587.1 ABC transporter BAC0350 Protein 3e-82 61
Pecwa_2210 YP_003259587.1 ABC transporter BAC0400 Protein 1e-46 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pecwa_2210 YP_003259587.1 ABC transporter VFG0526 Protein 3e-82 61