Gene Information

Name : Pecwa_2044 (Pecwa_2044)
Accession : YP_003259430.1
Strain : Pectobacterium wasabiae WPP163
Genome accession: NC_013421
Putative virulence/resistance : Virulence
Product : 3-deoxy-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1212
EC number : 2.7.7.38
Position : 2225228 - 2225977 bp
Length : 750 bp
Strand : +
Note : CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS

DNA sequence : 
ATGACTTTTACTGTGATCATCCCTGCTCGTTTTGCATCAAGTCGACTGCCTGGGAAACCGCTGGCGGACATCAACGGCAA
ACCGATGGTCGTCCATGTGATGGAACGGGCGCTGGAATCTGGTGCGCAGCGCGTTATAGTGGCTACCGATCACCCTGACG
TTGAGGTTGCCGTGCGACAAGCTGGTGGCGAGGTGTGTCTGACCCGCAACGATCATAATTCTGGTACAGAGCGTCTGGCT
GAAGTCATTGAACGGTACGGTTTTACCGATGACGATATTATCGTTAACGTTCAGGGTGATGAGCCGCTCATTCCTTCCAT
TATTATTCGCCAAGTGGCGGAGAACCTCGCAGCGAGTAAAGCGGGAATGGCAACGCTGGCGGTGCCGATTGAAACCAGCG
AAGAAGCGTTCAATCCAAATGCAGTGAAAGTGGTTACCGACGCCGAGGGATACGCACTGTATTTCTCTCGGGCGACAATT
CCTTGGGACAGGGAACGTTTTGCTCAGTCGAAGGAAACCATTGGCGATCATTTCCTGCGTCATATTGGCATTTATGCTTA
CCGTGCGGGGTTTGTGCGACGTTATGTCACTTGGGCACCAAGCCAACTGGAGCAAATCGAATTGTTGGAGCAACTGCGTG
TGTTGTGGTACGGCGAGAAGATCCATGTTGCGGTCGCCAAAGCCGTTCCTAGTGTTGGTGTGGACACACCAGAAGATCTA
GCCCGCGTGCGGCAAATCATGGCGAGTTAA

Protein sequence : 
MTFTVIIPARFASSRLPGKPLADINGKPMVVHVMERALESGAQRVIVATDHPDVEVAVRQAGGEVCLTRNDHNSGTERLA
EVIERYGFTDDDIIVNVQGDEPLIPSIIIRQVAENLAASKAGMATLAVPIETSEEAFNPNAVKVVTDAEGYALYFSRATI
PWDRERFAQSKETIGDHFLRHIGIYAYRAGFVRRYVTWAPSQLEQIELLEQLRVLWYGEKIHVAVAKAVPSVGVDTPEDL
ARVRQIMAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 2e-34 46
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 4e-34 45
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 6e-34 45