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Name : Pecwa_1990 (Pecwa_1990) Accession : YP_003259376.1 Strain : Pectobacterium wasabiae WPP163 Genome accession: NC_013421 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 2162298 - 2163593 bp Length : 1296 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTCGATCCCAATTTACTGCGTAATGAGCTAGACGCAGTCGCCGAAAAGTTACTGGCTCGCAGAGGCTTTAAGCTGGA TGTTGAGACCCTGCGTAAGCAGGAAGAACGTCGTAAAGTATTGCAGGTAGAAACCGAAAATCTGCAAGCCGTGCGTAACT CCCGATCGAAAGAGATTGGCGCAGCGAAAGCACGCGGTGAAGATATCGAGCCTTTACGTCGTGAAGTTAACACATTAGGC GAAGAACTGGATGCCGCGAAAGCAGAACTGGATCAGTTGCAGAATGAAATTCGCGATCTGGCGCTAACGATCCCAAACCT GCCGGATGATTCTGTGCCGTTAGGTAAAGATGAGACACAAAATCAGGAAGTTGCCCGCTGGGGTGAGCCGCGTAAATATG ATTTCCCTGTACGCGATCATGTTGAACTCGGTGAGATGGCTGCCGGACTGGATTTTGCTGCCGCAGTGAAACTAACGGGT GCGCGTTTTGTTGTGATGAAAGGACAGATTGCTCGTCTACATCGTGCGCTCGCTCAGTTCATGCTTGACTTGCATACACA ACAGCATGGTTATCAGGAAGCGTATGTACCCTACCTGGTAAACCATGCCACGCTATACGGCACGGGCCAGTTACCTAAGT TTGGTGAAGATCTGTTCCACACCAATCCTTTAAGCGAAGAAGCAGACAGCAGCCAATATGCGCTGATCCCGACGGCTGAA GTCCCGCTGACTAATCTGGTGCGTGACGAGATTCTTGATGAAGAATCCTTGCCATTGAAAATGACCGCACACACGCCTTG TTTCCGTTCTGAAGCAGGGTCGTATGGTCGTGATACGCGTGGATTGATCCGTATGCACCAGTTTGACAAAGTTGAACTGG TACAAATCGTCCGCCCTGAAGATTCTATGCAGGCCTTGGAAGAATTGACGACCCATGCTGAAACGGTGCTGCAACTGCTG AAGTTGCCTTACCGTAAAGTTTTGCTGTGCACGGGGGATATGGGTTTTGGTTCCACCAAAACTTACGATCTGGAAGTGTG GTTACCAGCGCAGGACACGTATCGTGAAATCTCTTCCTGCTCTAACATGTGGGATTTCCAGGCACGTCGTATGCAGGCCC GCTGCCGTAGCAAGTCCGATAAGAAGACTCGGCTGGTTCACACGTTGAATGGTTCTGGTCTGGCAGTCGGTCGGACACTG GTGGCTGTTCTGGAAAACTACCAGCAGGCTGATGGCCGAATTGAAATTCCTGAAGCGCTGCGTCCGTATATGGGCGGGTT GGAATTTATTGGCTAA Protein sequence : MLDPNLLRNELDAVAEKLLARRGFKLDVETLRKQEERRKVLQVETENLQAVRNSRSKEIGAAKARGEDIEPLRREVNTLG EELDAAKAELDQLQNEIRDLALTIPNLPDDSVPLGKDETQNQEVARWGEPRKYDFPVRDHVELGEMAAGLDFAAAVKLTG ARFVVMKGQIARLHRALAQFMLDLHTQQHGYQEAYVPYLVNHATLYGTGQLPKFGEDLFHTNPLSEEADSSQYALIPTAE VPLTNLVRDEILDEESLPLKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVELVQIVRPEDSMQALEELTTHAETVLQLL KLPYRKVLLCTGDMGFGSTKTYDLEVWLPAQDTYREISSCSNMWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTL VAVLENYQQADGRIEIPEALRPYMGGLEFIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-104 | 55 |
