|
Name : Pecwa_1902 (Pecwa_1902) Accession : YP_003259289.1 Strain : Pectobacterium wasabiae WPP163 Genome accession: NC_013421 Putative virulence/resistance : Unknown Product : integrase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0582 EC number : - Position : 2062737 - 2063987 bp Length : 1251 bp Strand : - Note : PFAM: integrase; KEGG: eca:ECA2750 prophage integrase DNA sequence : ATGGCAATTCAGACAAAGCGCCTCACAAACACGGAAGTCAAAGCCGCTAAAGCAATAGACAAAGAATTGTCACTGCATGA TGGAGGCGGGCTGCTATTGTTCGTCAAACCTTCCGGCACAAAGACATGGCGTTTTCGCTATTACCAGCCACAAACTAAAA AACGCACTACGTTGACGTTTGGTAGCTATCCGGCAATTTCTTTGGCTGATGCCAGGCAAATGCGGGAAGCAGCCAAAGCA CTCTTAGAAAAAAGTATCGATCCACAATTCCACCAGCAACAGCAGCGCGAACAAGAACAAGCCATCAACCTAAACACATT CGCTAAAGTCTCCGCTGACTGGTACGAATTAAAAAAGTCTCAACCGCTGGCCGAGAACACCATTAAAGATATTTGGCGTT CGCTAGAAAAATACGTGTTCCCGTTCATCGGAACCTTACCGATAACCCAGCTTACCGCTCGTCACTTCATCACCGCGCTG GAGCCGATACAGGCCAGTGGCAAACTGGAAACCGTCAAGCGGGTAAGTCAGCGAATTAACGAGGTGATGGATTATGCGGT TAACTCCGGGCTAATTCCTGCGAATCCCGCCGCCAAGATCCGCAAAGCGTTTCAGACGCCGGTGAAAACTCATATGCCGA CCATTCGGCCAGAGGCATTACCTGGCTTGATGAAAACGCTATCGGTCGCCAGCATTGAGTTACAGACCCGCTTATTGATT GAATGGCAGCTACTCACCGTTACCCGCCCTGCCGAAGCCGCTGAAACCCGTTGGAGCGAGATAAACCTTACAGATAACAC CTGGACGATCCCCGCTGGCCGTATGAAGATGCGCCGTGATCACATTATTCCCCTGCCCCCACAGGCATTAGCCATTCTGG ACGCCATGAAGCCCATCAGCGGACACCGTGAATACCTGTTTCCATCCAGTAAAGATCCGAAGCAGCCGATGAACAGCCAA ACCGCTAACGCCGCACTGCGCCGTATGGGTTACAAAGGCGTACTGGTATCTCACGGCCTACGCGCCATCTTCAGCACCGC CGCCAATGAAGAAGGCTTCTCGCCAGATGTGATCGAAGCCGCTCTCGCCCACGTAGACACCAACGAAGTGCGCCGTGCCT ATAACCGCTCCACCTATTTGGAACAACGCAAAGTGTTGATGTGCTGGTGGGGTGAATTTGTGGAAACAGCCGCAACAGGA AAAGTAATGGCGTCGGAAGGAGCCAGAGGATTACGCATCGCCAATAGTTAA Protein sequence : MAIQTKRLTNTEVKAAKAIDKELSLHDGGGLLLFVKPSGTKTWRFRYYQPQTKKRTTLTFGSYPAISLADARQMREAAKA LLEKSIDPQFHQQQQREQEQAINLNTFAKVSADWYELKKSQPLAENTIKDIWRSLEKYVFPFIGTLPITQLTARHFITAL EPIQASGKLETVKRVSQRINEVMDYAVNSGLIPANPAAKIRKAFQTPVKTHMPTIRPEALPGLMKTLSVASIELQTRLLI EWQLLTVTRPAEAAETRWSEINLTDNTWTIPAGRMKMRRDHIIPLPPQALAILDAMKPISGHREYLFPSSKDPKQPMNSQ TANAALRRMGYKGVLVSHGLRAIFSTAANEEGFSPDVIEAALAHVDTNEVRRAYNRSTYLEQRKVLMCWWGEFVETAATG KVMASEGARGLRIANS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0516 | NP_230167.1 | phage integrase | Not tested | VSP-2 | Protein | 2e-99 | 54 |
| int | AAK20803.1 | integrase | Not tested | VPI | Protein | 3e-106 | 52 |
| unnamed | AAA82714.1 | integrase | Not tested | VPI | Protein | 3e-106 | 52 |
| VC0847 | NP_230494.1 | phage family integrase | Not tested | VPI-1 | Protein | 5e-106 | 52 |
| VC0395_A0372 | YP_001216328.1 | phage family integrase | Not tested | VPI-1 | Protein | 5e-106 | 52 |
| int | AAK20773.1 | integrase | Not tested | VPI | Protein | 3e-106 | 52 |
| VC1758 | NP_231394.1 | phage family integrase | Not tested | VPI-2 | Protein | 5e-95 | 49 |
| VC0395_A1357 | YP_001217300.1 | phage family integrase | Not tested | VPI-2 | Protein | 5e-95 | 49 |
| VPI2_0001 | ACA01818.1 | phage family integrase | Not tested | VPI-2 | Protein | 2e-95 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Pecwa_1902 | YP_003259289.1 | integrase | VFG1092 | Protein | 2e-95 | 49 |
