Gene Information

Name : Pecwa_1826 (Pecwa_1826)
Accession : YP_003259216.1
Strain : Pectobacterium wasabiae WPP163
Genome accession: NC_013421
Putative virulence/resistance : Resistance
Product : major facilitator superfamily protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG3104
EC number : -
Position : 1985691 - 1986938 bp
Length : 1248 bp
Strand : -
Note : PFAM: major facilitator superfamily MFS_1; KEGG: pct:PC1_1426 major facilitator superfamily MFS_1

DNA sequence :
ATGTCAGACCTTACCGCCAACCGCGGCCCACGGCCTTACCCTCCGCTGCTTCTGGGTAGCCAGCTTGTTTTCAACATTGG
CTTTTATGCCGTTGTGCCGTTTCTGGCGATTTTCCTGCGCGATGACATGCTGCTTTCCGGCTGGGCTATCGGGATAGTGA
TTGGTCTACGCACCTTTTCTCAGCAGGGCATGTTTTTAGTCGGCGGCGCGCTGGCGGACCGCTTCGGCGCACGCGTGATT
ATCCTGTGCGGCTGCGTGGTGCGCATCAGCGGCTATTTACTGCTGGCGCTGGGCGACTCGCTGTGGCCGATCATCCTCGG
TGCCTGTCTGACCGGCGTTGGTGGTGCCCTGTTTTCTCCTGCCATTGAAGCGCTGATGGCGCAGGCCGGGACGCAAAGCG
AAAAAGAGGGAAAACGCAGCCGCTCCGAGTGGTTCGCCCTGTTTGCCATTTGCGGCGAACTGGGTGCCGTACTGGGGCCG
TTGCTCGGCTCAGTGCTGGCCGGGTACGGATTCCAGCGTGTGGCGCTAGCCGGTGCGGGCGTGTTTGTCATCGCGCTTAT
TATCCTGTTTTTCAGCCTGCCGCCAACGCAGCGTAATCGGGAAGAATTACAGATTGCCCCGTGGTGGGAGACCTTCCGCC
AACGGCGCTTTGTCGCATTCATCATCGCCTATAGCGCTTACCTGTTCAGCTACAACCAGCTCTATCTGGCACTGCCGGTT
GAACTGCATCGCTCCGGCAGCAGCGAGAAAGACCTCGGCCCACTGTTTGTGCTGGCCTCACTGCTGGTGATCGGGTTACA
GCTCCCACTGGCGCGTTTTGCCCGCCGGGTTGGCGCGGCACGCATGCTGCCATTGGGTTTCGCGTTGTTGGCAGCCTCAT
TCCTTAGCGTCGCACTGTTTGCCTCCAGTACGCCGCCGGAGGGATGGCAACGTCTGCTTCCCGCTATCTCATTAATTACC
CTGCTGACACTGGGGCAGATGCTGATCGTCCCTGTTGGGATGGACCTCATTCCCCGCTTTGCTAATAACCAGAACCTGGG
TGCGCACTATGGCGCATTAGCATCAATGGGCGGCATCGCCGTGCTGGTCGGTAATTTTATACTCGGTAGCCAACTCGATC
GAGCACTGACGCCATCACCACAGGCCGCCATTCCGTGGGTGCTGCTCGCCGCCGTACCCTTGTGCAGCTCGCTAGCTATG
CTGGTTATCTGCCGCCCGTTTAAATCCGCTTCAACCATAAATGGATAA

Protein sequence :
MSDLTANRGPRPYPPLLLGSQLVFNIGFYAVVPFLAIFLRDDMLLSGWAIGIVIGLRTFSQQGMFLVGGALADRFGARVI
ILCGCVVRISGYLLLALGDSLWPIILGACLTGVGGALFSPAIEALMAQAGTQSEKEGKRSRSEWFALFAICGELGAVLGP
LLGSVLAGYGFQRVALAGAGVFVIALIILFFSLPPTQRNREELQIAPWWETFRQRRFVAFIIAYSAYLFSYNQLYLALPV
ELHRSGSSEKDLGPLFVLASLLVIGLQLPLARFARRVGAARMLPLGFALLAASFLSVALFASSTPPEGWQRLLPAISLIT
LLTLGQMLIVPVGMDLIPRFANNQNLGAHYGALASMGGIAVLVGNFILGSQLDRALTPSPQAAIPWVLLAAVPLCSSLAM
LVICRPFKSASTING

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1564 YP_005683922.1 MFS-type drug efflux transporter Not tested PiCp 6 Protein 7e-57 41
CpI19_1569 YP_005686011.1 MFS-type drug efflux transporter Not tested PiCp 6 Protein 7e-57 41
Cp1002_1562 YP_005681823.1 MFS-type drug efflux transporter Not tested PiCp 6 Protein 2e-56 41