Gene Information

Name : Pecwa_1696 (Pecwa_1696)
Accession : YP_003259090.1
Strain : Pectobacterium wasabiae WPP163
Genome accession: NC_013421
Putative virulence/resistance : Virulence
Product : phage transcriptional regulator, AlpA
Function : -
COG functional category : K : Transcription
COG ID : COG3311
EC number : -
Position : 1848910 - 1849116 bp
Length : 207 bp
Strand : +
Note : PFAM: prophage CP4-57 regulator; KEGG: pct:PC1_1597 phage transcriptional regulator, AlpA

DNA sequence : 
ATGAATACCCAGAATCGCCTTATTCGTTTCCCCGAAGTAATGAGAAAAACCGGCTTTGGAAAAGCCTGGCTCTATCGTCT
TATTAGTGAAGAGCGTTTCCCCCAACCTGTAAAAATCGGTATCCGTGCTGTCGCATTTGTTGAACATGAAATTGATGAAT
GGATATTGTCCGCTATCGAAAAAAGGAAATGTAAAGAATTCCAGTGA

Protein sequence : 
MNTQNRLIRFPEVMRKTGFGKAWLYRLISEERFPQPVKIGIRAVAFVEHEIDEWILSAIEKRKCKEFQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1809 NP_231443.1 transcriptional regulator Not tested VPI-2 Protein 7e-10 49
VC0395_A1406 YP_001217349.1 transcriptional regulator Not tested VPI-2 Protein 7e-10 49
VPI2_0041 ACA01856.1 predicted transcriptional regulator Not tested VPI-2 Protein 4e-10 47
VC0395_A1382 YP_001217325.1 transcriptional regulator Not tested VPI-2 Protein 1e-06 44
VPI2_0033 AAX20900.1 transcriptional regulator Not tested VPI-2 Protein 9e-07 44
VC1785 NP_231420.1 transcriptional regulator Not tested VPI-2 Protein 1e-06 44
ORF SG104 AAN62325.1 phage-related protein Not tested PAGI-3(SG) Protein 1e-07 43
VC0497 NP_230151.1 transcriptional regulator Not tested VSP-2 Protein 3e-06 42
unnamed CAB46594.1 DNA-binding protein Not tested HPI Protein 3e-05 41
unnamed CAA21398.1 - Not tested HPI Protein 5e-05 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pecwa_1696 YP_003259090.1 phage transcriptional regulator, AlpA VFG1141 Protein 2e-10 49
Pecwa_1696 YP_003259090.1 phage transcriptional regulator, AlpA VFG1118 Protein 4e-07 44