Gene Information

Name : Pecwa_1667 (Pecwa_1667)
Accession : YP_003259064.1
Strain : Pectobacterium wasabiae WPP163
Genome accession: NC_013421
Putative virulence/resistance : Virulence
Product : phage transcriptional regulator, AlpA
Function : -
COG functional category : K : Transcription
COG ID : COG3311
EC number : -
Position : 1805560 - 1805772 bp
Length : 213 bp
Strand : -
Note : PFAM: prophage CP4-57 regulator; KEGG: dze:Dd1591_0481 phage transcriptional regulator, AlpA

DNA sequence :
ATGTTCCAACAAAACACTCATCCCGTTCCTGAGCGTCGTATCCTGCGCCGGGCTGAAGTTGAAGCCAAAACAGGCTTTAA
AAGGGCCCATATTTATAATTTGATGAAGGAAGGTAAGTTTCCCAAGGCTCTGCGCCTCGGCGTCCGCGCCGTCGGATGGG
ACTCTGCCGAAATCGATCAGTGGATCACTGATCGTCTCAAAGAACGCGCCTGA

Protein sequence :
MFQQNTHPVPERRILRRAEVEAKTGFKRAHIYNLMKEGKFPKALRLGVRAVGWDSAEIDQWITDRLKERA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG104 AAN62325.1 phage-related protein Not tested PAGI-3(SG) Protein 2e-22 85
ORF C109 AAN62202.1 phage-related protein Not tested PAGI-2(C) Protein 1e-19 72
unnamed CAB46594.1 DNA-binding protein Not tested HPI Protein 7e-11 48
unnamed CAA21398.1 - Not tested HPI Protein 1e-10 48
VC0497 NP_230151.1 transcriptional regulator Not tested VSP-2 Protein 5e-08 45
VPI2_0033 AAX20900.1 transcriptional regulator Not tested VPI-2 Protein 2e-08 43
VC1785 NP_231420.1 transcriptional regulator Not tested VPI-2 Protein 2e-08 43
VC0395_A1382 YP_001217325.1 transcriptional regulator Not tested VPI-2 Protein 2e-08 43
PMI2608 YP_002152324.1 prophage regulatory protein Not tested Not named Protein 4e-09 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pecwa_1667 YP_003259064.1 phage transcriptional regulator, AlpA VFG1118 Protein 6e-09 43