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Name : Pecwa_1657 (Pecwa_1657) Accession : YP_003259054.1 Strain : Pectobacterium wasabiae WPP163 Genome accession: NC_013421 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0550 EC number : - Position : 1795779 - 1797779 bp Length : 2001 bp Strand : - Note : KEGG: dze:Dd1591_0466 DNA topoisomerase III; TIGRFAM: DNA topoisomerase III; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; DNA topoisomerase type IA zn finger domain protein; SMART: DNA topoisomerase I DNA-binding; DNA top DNA sequence : ATGTGCGAGAAGCCCTCTCAGGGCAAAGATATCGGACGTGTACTGGGGGCCACCCAAAGAGGTAATGGCTGCCTCGCAGG TTCAGGTATCACCGTAACCTGGTGCATTGGTCATCTCGTTGAGGCCGCCCCCCCAGAAACCTATGGCGAGCAGTACAAAC GCTGGTCTATCGAGCAGTTGCCCATTATCCCTGAGCGCTGGCGTGTCGAAGTCAAATCAAAGACCGCTTCGCAATTCAAC GTCGTCAAAAATCTTCTGAGCAAGGCCACTGAGCTGGTCATCGCGACGGATGCTGACCGGGAGGGCGAGTTGATCGCACG CGAGATCATCGAACTGTGCGGTTATCACGGCCCCATCCAGCGGCTCTGGTTATCGGCACTCAATGACGCGTCGATCCGCA AAGCACTGGCAGCGCTCAGACCATCAGGCGAAACTCTGCCGATGTACTTCTCGGCCCTGGCACGTTCCCGCGCAGACTGG CTGATCGGCATGAACCTCAGTCGCCTGTTCACCGTCATGGGGCGGCAGGCCGGTTACGACGGCGTACTCTCCGTTGGCCG GGTACAAACCCCAACGCTGAAACTGGTTGTCGATCGCGACCGCGAGATCGCTCGCTTTGTCTCAGTGCCGTTCTGGACAG TCGAGACCGTGCTATCAAGCGCAGGTCAATCTTTCACTGCAGGCTGGCTGGCACCAGATACAGCAACAGACGATGCGGGC CGTTGTCTGCAGGAGCCCATAGCCCGACAAGCGGCCGAACGCATGCGTATTGCTGGCAGCGCACAGGTCACGTCTGTCGA GACGGAACGCCTGCGTGAAGGCCCACCGTTACCCTTCGATCTGGGCACTCTGCAGGAAATCTGTTCCAAGCAACTGGGCC TGGATGTGCAGGAAACCCTGGAAATCGCCCAGGCACTGTACGAGACTCACAAAGCCACGACGTACCCGCGCTCAGATTCC GGCTACCTGCCTGAAAGCATGTTCGCCGAGGTGCCGGTGGTACTCGACAGTCTTCTCAAAACCGATCCAGGCCTGAGGCC GATCGTTGACCAGCTAGACCGCAATCAGCGATCGCGTGCATGGAACGACAGCAAAGTCACGGCGCACCACGGCATCATCC CCACACTCGAACCCGCTAATCTCACGGCGATGAGCGACAAAGAACAGGCAGTCTATAAACTGATCCGTGCACACTATCTG GCGCAGTTTCTGCCGCAACATGAATTCGACCGTACCACCGCGTGCCTGTCATGCACGGGTGAAACACTGCAAGCGGTCGG CAAGCAGATCGTCGTCATCGGGTGGCGACAGGTGCTCACTGAACCCAGGCCAGATGAGGATGGCGAGACCACACTACGCA GCCAGGTTCTGCCAGCGCTGCATGAAGGATTGTCCTGCCAGATAACTGGCATCGACTGTAAAGCACTCAAGACATCGCCG CCACGTCCTTATACCCAGGGCGAACTGGTCAAGGCGATGAAGGGGGTAGCCAAACTGGTCTCAGATCCGCGCCTCAAACA AAAGCTGAAGGACACCACGGGTATCGGCACTGAGGCGACTCGCGCCAATATCATCAAAGGGTTACTTGACCGTGGCTACC TGCTGAAGAAAAGCCGTTCAGTACGCGCCTCCGATGCGGCCTTTACACTCATCGACGCCGTTCCCGGTGCCATTGCCGAC CCAGGCATGACTGCTATCTGGGAACAGGCGCTGGACATGATCGAAGCCGGTCAGCTCACACTCGATGTCTTTATCGACAA GCAGTCAGCCTGGATCACGCAATTGGTGCAGCAGTATCGAGGGGCATCTCTGTCTATCAAGGTGCCACAGGGACCCGCAT GCCCCGAATGCGGCACCGCTATGCGTCAACGCACCGGCAAGAGCGGGCCATTCTGGTCTTGTCCTCGTTACCCCGACTGC AAAGGCTCTCAGCCTATCGACAGTGGTAAACACAAACGCGCCATGCCGCGCAAGCGTAGCCGCAGCTCCCGGGAGCCATG A Protein sequence : MCEKPSQGKDIGRVLGATQRGNGCLAGSGITVTWCIGHLVEAAPPETYGEQYKRWSIEQLPIIPERWRVEVKSKTASQFN VVKNLLSKATELVIATDADREGELIAREIIELCGYHGPIQRLWLSALNDASIRKALAALRPSGETLPMYFSALARSRADW LIGMNLSRLFTVMGRQAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPFWTVETVLSSAGQSFTAGWLAPDTATDDAG RCLQEPIARQAAERMRIAGSAQVTSVETERLREGPPLPFDLGTLQEICSKQLGLDVQETLEIAQALYETHKATTYPRSDS GYLPESMFAEVPVVLDSLLKTDPGLRPIVDQLDRNQRSRAWNDSKVTAHHGIIPTLEPANLTAMSDKEQAVYKLIRAHYL AQFLPQHEFDRTTACLSCTGETLQAVGKQIVVIGWRQVLTEPRPDEDGETTLRSQVLPALHEGLSCQITGIDCKALKTSP PRPYTQGELVKAMKGVAKLVSDPRLKQKLKDTTGIGTEATRANIIKGLLDRGYLLKKSRSVRASDAAFTLIDAVPGAIAD PGMTAIWEQALDMIEAGQLTLDVFIDKQSAWITQLVQQYRGASLSIKVPQGPACPECGTAMRQRTGKSGPFWSCPRYPDC KGSQPIDSGKHKRAMPRKRSRSSREP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | AAN62194.1 | putative DNA topoisomerase III | Not tested | PAGI-2(C) | Protein | 0.0 | 78 |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 0.0 | 76 |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 0.0 | 63 |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 6e-171 | 50 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 6e-171 | 50 |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 4e-171 | 50 |
| PMI2630 | YP_002152332.1 | DNA topoisomerase III | Not tested | Not named | Protein | 3e-167 | 50 |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 4e-167 | 49 |
