Gene Information

Name : Pecwa_1626 (Pecwa_1626)
Accession : YP_003259023.1
Strain : Pectobacterium wasabiae WPP163
Genome accession: NC_013421
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG3451
EC number : -
Position : 1765585 - 1768434 bp
Length : 2850 bp
Strand : -
Note : KEGG: dze:Dd1591_0435 hypothetical protein

DNA sequence :
ATGGTCTGGTCGCTTCCCTGGCGCAAGCCCACTGTGCCGACCAAAGGCGAACAGCCGGACGGCTGGCAGCGCCACATCGA
TACACTACAGCAGGCAGGCATTCCCGAACCCGGTACCAGCGTAAGGGGGAGCCGTCCCGCTACCCAGGCCGATGAGCAGG
CCTTGTACGAGGTGGCCCCATCGTTTGTCGCGTTGCTGCCCTGGGTTGAATATTTGCCCGAATCACAAAGTATGCTGCTG
GAGGATGGTGTCTCAGTCGCCGCCTTCTTTGAACTGACCCCGCTGGGTACAGAAGGCCGTGAGCCGGTCTGGCTGGCCCA
GGCACGGGATGCGCTGGAAAACGCGCTGCAGGACAGCTTCGACGAGCTCGACGACAATCCCTGGGTACTGCAACTCTACG
CTCAGGACGAGACCAACTTTGATCAGTATCTGCAGACCCTCAAGGGCTACATCCAGCCACGTGCGCAGCACTCACGCTTC
ACCGAATTCTATCTGCATTCGATGGCCCATCACCTGCGCGCAGTAGCAAAGCCGGGAGGCCTGTTCGAGGATACGACAGT
CACGCGTCTGCCCTGGCGAGGGCAAACACGACGGGTACGCATGATCGTCTATCGCCGCACCGCAGGCAGCACGACCCGAC
GCGGCCAGACGCCCGAGCAGGCATTGAGTGTGGTCTGTGATCGCCTGAGCGGTGGTCTGGCCAACGCAGGCATCCGCGCA
CAGCGTCTGGATGCATCGCACATCCACAACTGGCTGCTGCGCTGGTTCAACCCACATCCCACGCTGCTGGGCCACAGCGC
CGAAGACTGCGAACGTTTCTACCAGTTGACCGCCTACCCGGACACCCACGACCTCGACGAAATCGAGCTGGCCTCCGGGT
GCGATTTCAGCCAGAGGCTGTTCTTCGGCCAGCCACGTTCAGATACGGCCCGGGGCGAGTGGCACTTTGACGGCATGCCG
CATCGGGTGATGACGACCGACCGCCTGCGCGCACCGCCCAGTGTAGGTCATATGACAGGCGAGAATCGCAAAGGCGACGC
CATCAACACCTTGTTCGACCAGATGCCGGAAGACACGATGATGTGCCTGACACTGGTTGCCACACCACAGGACGTACTCG
AAACACACCTGAATCATCTGGCAAAGAAAGCCGTTGGCGAAACGCTGGCCTCCGAACAAACCCTGGCGGATGTGCAAGAG
GCGCGCTCACTGATCGGCAGCGCCCACAAACTATACCGTGCCAGCCTGGCCTTTTACCTTCGTGGCAAGGATGAAGAAGA
ACTCGACAGCCGGGGACTGCAACTGGCCAACGTGATGCTGGGCGCAGGCCTGCAGCCGGTACGCGAAGAGGACGAGGTCG
CGCCGCTCAACACCTACCTGCGCTGGCTGCCGTGTATGTACAACCCGGCCCAGGACCGCAAACAGTGGTACACACAAATG
ATGTTCGCCCAGCATGTGGCCAACCTCTCACCGACCTGGGGACGTAGCCGGGGTACAGGTCACCCGGGGATCACTGTCTT
CAATCGCGGTGGAGGCCTGATCACGTTTGATCCCTTCAACCGCCTGGATCGGCAGATGAACGCGCACCTTTTCCTGTTCG
GCCCTACAGGTTCGGGCAAGAGCGCCACCCTCAACAACCTGCTCAATCAGGTCACCGCCATCTATCGTCCACGGATCTTC
ATTGTGGAGGCTGGCAATTCCTTCGGGCTGTTCTGCGAGTTCGCCCGGCGTTTAGGGCTGACTGTCAACCGTGTCAAGCT
CGCTCCGGGTGCGGGCGTCAGTCTCGCACCGTTCGCCGATGCCCGCAGACTCATCGAAACCCCCAGTGATGTACAAACAC
TCGATGCCGATGAACTCGATGACGAGCCACAGAGCAAGGAAGCCGAGGCCGACGAACAACGCGATGTGCTGGGCGAACTG
GAGATCACGGCACGCCTGATGATCACGGGGGGTGAAGACAAGGAAGAAGCCCGCATGACCCGCGCCGATCGCTCGTTGAT
CCGCCAATGCATTCTGGACGCCGCTCAGCGCTGCGTCGCTGCGAACCGTACCGTGCTGACCCGTGACGTGCGCGATGCAC
TACGTGAACGGGGTCATGACACGACGCTGCCGGAAATCCGGCGCGCTCGCCTGCTGGAGATGGCCGACGCGATGGATATG
TTCTGCCAGGGCAGCGATGGTGAAATGTTCGACCGTGACGGAACGCCCTGGCCCGAGGCCGACATCACCCTGGTCGACCT
GGCAACCTATGCACGCGAAGGCTACAACGCACAACTGTCGATCGCCTACATCTCGCTTATCAACACCGTCAACAACATCG
CCGAGCGCGACCAGTTCCTGGGCCGCCCCATCCTCAACGTGACGGACGAAGGCCATATCATCACCAAAAACCCCTTGCTC
TCGCCCTACGTCGTGAAGGTCACGAAAATGTGGCGCAAGCTGGGTGCGTGGTTTTGGCTCGCGACACAGAACATCGACGA
CCTGCCGAAGGCCGCAGAACCCATGCTCAACATGATCGAATGGTGGATTTGCCTGTCGATGCCACCCGACGAGGTGGAAA
AAATCGCAAAGTTCAGGGAACTGACACCCGCGCAGAAAGCGCTGATGCTGTCCGCACGCAAAGAATCCGGAAAATTCACC
GAAGGCGTCATCCTCTCCAAGAGCCTGGAAGTGCTCTTCCGTGCCGTACCGCCCAGCCTCTATCTCGCCTTGGCGCAGAC
CGAACCCGAGGAAAAAGCCGAACGCTACCAACTGATGCAGCAGCTCGGGATTGGGGAGTTGGATGCGGCGTTCAAAGTGG
CCGAAATGATTGATCATGCACGTGGTATCACGCCCATGGCGCAAAGGTAA

Protein sequence :
MVWSLPWRKPTVPTKGEQPDGWQRHIDTLQQAGIPEPGTSVRGSRPATQADEQALYEVAPSFVALLPWVEYLPESQSMLL
EDGVSVAAFFELTPLGTEGREPVWLAQARDALENALQDSFDELDDNPWVLQLYAQDETNFDQYLQTLKGYIQPRAQHSRF
TEFYLHSMAHHLRAVAKPGGLFEDTTVTRLPWRGQTRRVRMIVYRRTAGSTTRRGQTPEQALSVVCDRLSGGLANAGIRA
QRLDASHIHNWLLRWFNPHPTLLGHSAEDCERFYQLTAYPDTHDLDEIELASGCDFSQRLFFGQPRSDTARGEWHFDGMP
HRVMTTDRLRAPPSVGHMTGENRKGDAINTLFDQMPEDTMMCLTLVATPQDVLETHLNHLAKKAVGETLASEQTLADVQE
ARSLIGSAHKLYRASLAFYLRGKDEEELDSRGLQLANVMLGAGLQPVREEDEVAPLNTYLRWLPCMYNPAQDRKQWYTQM
MFAQHVANLSPTWGRSRGTGHPGITVFNRGGGLITFDPFNRLDRQMNAHLFLFGPTGSGKSATLNNLLNQVTAIYRPRIF
IVEAGNSFGLFCEFARRLGLTVNRVKLAPGAGVSLAPFADARRLIETPSDVQTLDADELDDEPQSKEAEADEQRDVLGEL
EITARLMITGGEDKEEARMTRADRSLIRQCILDAAQRCVAANRTVLTRDVRDALRERGHDTTLPEIRRARLLEMADAMDM
FCQGSDGEMFDRDGTPWPEADITLVDLATYAREGYNAQLSIAYISLINTVNNIAERDQFLGRPILNVTDEGHIITKNPLL
SPYVVKVTKMWRKLGAWFWLATQNIDDLPKAAEPMLNMIEWWICLSMPPDEVEKIAKFRELTPAQKALMLSARKESGKFT
EGVILSKSLEVLFRAVPPSLYLALAQTEPEEKAERYQLMQQLGIGELDAAFKVAEMIDHARGITPMAQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C47 AAN62141.1 hypothetical protein Not tested PAGI-2(C) Protein 0.0 83
ORF SG57 AAN62279.1 hypothetical protein Not tested PAGI-3(SG) Protein 0.0 78
virB4 CAI36125.1 VirB4 component Not tested PPHGI-1 Protein 0.0 67
unnamed ABR13362.1 hypothetical protein Not tested PAGI-5 Protein 0.0 64
RL022 AAP84149.1 conserved hypothetical protein Not tested PAPI-1 Protein 0.0 63
EXA33 ABD94642.1 conserved hypothetical protein Not tested ExoU island A Protein 0.0 63
YE3482 YP_001007641.1 hypothetical protein Not tested YAPI Protein 0.0 52
STY4573 NP_458658.1 hypothetical protein Not tested SPI-7 Protein 0.0 52
YpsIP31758_3705 YP_001402659.1 hypothetical protein Not tested YAPI Protein 0.0 52
api39 CAF28513.1 hypothetical protein Not tested YAPI Protein 0.0 52
PMI2576 YP_002152295.1 hypothetical protein Not tested Not named Protein 0.0 50
Pmu_03070 YP_005176206.1 conjugative transfer ATPase TraC-like, PFL family Not tested ICEPmu1 Protein 0.0 50