Gene Information

Name : Pecwa_1620 (Pecwa_1620)
Accession : YP_003259017.1
Strain : Pectobacterium wasabiae WPP163
Genome accession: NC_013421
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1760110 - 1761510 bp
Length : 1401 bp
Strand : -
Note : KEGG: dze:Dd1591_0430 hypothetical protein

DNA sequence :
ATGATGAAACGTCTCGACCCGAAAGCGTTTTCAATTCTTGTGCCGCGCCTGTGGCAACCCACGCTATGGGTTGCTGCACT
GACGCTGAGCAGTGGTCTGGCTCTGGCACAGGACGGAGGCTTCCAGAACAGCGGAGCCGTCATTGGTGATGAAGTGATGT
ACTCCATCGGCGGCGGTAACGCCGTATCAATGAGCGGTGCGGCCGGCATGCGCTCGATTGGTGTCGGTGTAGGCTGGAAC
AGCAACCTGATCTGCGGTGACATGAACATCAGTACCACCATCCAGAATCAGCTCAATGGGCTGACCAACGGCTTTCAGAA
CATCATGGGCAACGTGATCCAGAACGCCACCAGCGCCGTCGCCTCGTTGCCCGCACTGATCATCCAGCGGGCCGATCCGG
GCCTCTATAACCTGCTGACCAATGGCGTTCTGCAAGCCCGACTCGACTTTGATCGCTCCAAACTCACCTGCCGAGCGATG
GCTGAAAAAATGGCAGATACCGCAGGCGGCCAGCTTGGCTGGAGCCAGATCGCCGAAGGCATGGCGCTGCGTCAGGCCGT
CGGCAGCAGCGACGCTGTTTCAGCCATTGAACAGGCCGAAAAAAACCGGGGTAACGCCGGCGTACCGTGGGTGGGTGGCA
GCAATGCCGGCGGTACAGGTCAGCGCTCAATCAAGGTCGTCGGGGACGTAACCCGTGCAGGCTACAATCTGGTCAATGGC
CGTGGGGTAACCGACACCGCCCCCATCGACCCGGCAAATTGCCAAAGCCTGTCCTGCCAGACGTGGGCATCTCCCCAACA
AGCCATCGACTTTGCCACGCGTGTGCTGGGCGAACAGGAACAACGCACCTGCGAAGGCTGCACCAAGACCGAGACCTTGC
CTGGCGTCGGATTGACCCCGGTCATCCAGGACGAATACGACGCCAAACTGGAAGCGCTGCAAGAGCTGGTCAGCGGAGCA
CGCCACACCACGTTCGAGAACCTTCGCAAGGCTGGCAGTACCTCACTACCCATCACCCGTGGCGTGATCGAGGCACTGCG
TGACGAACCTGATCAAGACATCCTGGCCCGACGTCTGGCCTCCGAAGTCGCGCTGGCATCGGTACTGGAAAAAGCCCTGC
TGCTGCAACGTACGCTACTGACCGGCAGGAAAGAGCCAAACGTCGCCGCCAACCAATTGGCAGTCGCCGCCGTCGATCAG
GAAAGCAACACGCTTGACCGCGAGATCCTCAATCTCAAAACCGAGCTTGAACTACGCCGCGAACTCGCCAACAACTCGCC
GATGGCCATCATCCAGCGCCACAGCGCACGCGCGGCAGGCTCACGCGGCATTTATGAAGGTGATCCCGAACCTAACCGTC
TTGACCAGTTGCAACGCCCCAACCCCGGAGGCACGCCATGA

Protein sequence :
MMKRLDPKAFSILVPRLWQPTLWVAALTLSSGLALAQDGGFQNSGAVIGDEVMYSIGGGNAVSMSGAAGMRSIGVGVGWN
SNLICGDMNISTTIQNQLNGLTNGFQNIMGNVIQNATSAVASLPALIIQRADPGLYNLLTNGVLQARLDFDRSKLTCRAM
AEKMADTAGGQLGWSQIAEGMALRQAVGSSDAVSAIEQAEKNRGNAGVPWVGGSNAGGTGQRSIKVVGDVTRAGYNLVNG
RGVTDTAPIDPANCQSLSCQTWASPQQAIDFATRVLGEQEQRTCEGCTKTETLPGVGLTPVIQDEYDAKLEALQELVSGA
RHTTFENLRKAGSTSLPITRGVIEALRDEPDQDILARRLASEVALASVLEKALLLQRTLLTGRKEPNVAANQLAVAAVDQ
ESNTLDREILNLKTELELRRELANNSPMAIIQRHSARAAGSRGIYEGDPEPNRLDQLQRPNPGGTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C42 AAN62135.1 hypothetical protein Not tested PAGI-2(C) Protein 2e-161 86
ORF SG50 AAN62272.1 hypothetical protein Not tested PAGI-3(SG) Protein 4e-155 76
pph90 CAI36131.1 hypothetical protein Not tested PPHGI-1 Protein 2e-137 66
EXA19 ABD94628.1 conserved hypothetical protein Not tested ExoU island A Protein 2e-130 65
unnamed ABR13356.1 hypothetical protein Not tested PAGI-5 Protein 4e-128 65
RL016 AAP84143.1 putative pathogenesis-related protein Not tested PAPI-1 Protein 1e-129 64
YpsIP31758_3700 YP_001402654.1 hypothetical protein Not tested YAPI Protein 2e-73 42
YE3466 YP_001007627.1 hypothetical protein Not tested YAPI Protein 7e-74 42
api55 CAF28529.1 putative exported protein Not tested YAPI Protein 4e-74 42
STY4577 NP_458662.1 hypothetical protein Not tested SPI-7 Protein 6e-77 41
t4274 NP_807872.1 hypothetical protein Not tested SPI-7 Protein 6e-77 41
unnamed AAX39459.1 unknown Not tested Hrp PAI Protein 1e-76 41