Gene Information

Name : Pecwa_1618 (Pecwa_1618)
Accession : YP_003259015.1
Strain : Pectobacterium wasabiae WPP163
Genome accession: NC_013421
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1758243 - 1759760 bp
Length : 1518 bp
Strand : -
Note : KEGG: dze:Dd1591_0428 hypothetical protein

DNA sequence :
ATGACGCTTTTCACTACCGATTATCTGGAGTATTACCTGACCCTGGTGAGCTGGGTCGTCCACAACGGTATTTGGGCTGT
ACTGGTTTCCAGCGGCGTGTTCGCCCTCCCCTTCGTGGCCATCATCATCGACGAGTGGCTGAGATCCCGTACTGAAGGTG
CCGACGAAGGCAACAAGGGCCTACTGTCTTCAATGCGTATTGAAAACCGGGTATGGGTGGCAATCGTGGTGGTGATGTTC
GCGGGTATTCCGTTCATTGATGTTGACCTCGACACGATCAGGTACGATCAGGCGCGTTCGGCACAGTGCCAGATCAGCGT
GCCCCAGCCCGAAGACACGGGCTGGTCGCAATCATTCAGCACCCTCAACAACCAGAGTGCAAAAGTGCCAGTCTGGTGGG
CCTTCATGCATGCGCTCTCACGCGCGATCACGGGTGCCTCGGTGGCGGCTATCCCATGCGGCACCGACCTGCGACAAATG
CGGATGGAGATCAATGCCACCCGGATTGACAATCCCCTACTGGCTCAGGAAGTCGCAGACTTTACCCACGACTGCTACGG
CCCTGCACGCGCCAAACTGTTCATGAGCCGTCCTGATCTTGATGAAGCACAAATGCACGACGTGACCTGGATCGGCTCGA
CCTATTTTGTCAGCACCGGCGGCTTCTATGACACCTACCGCGCCAAGACACCACGTGAGGGCTGGGCTTACGACAGCAAT
CGTGACGCTGGACTGGCTCAGGTGCCAAGCGGTGCGGGCTACCCAAGTTGTCGCCAGTGGTGGAGCGATGGTAGCAACGG
TTTACGCGCGCGCCTGCTGGCACAGGTCGATCCCAGCCTACTCAGTCGCATCGCCAACTGGGCGGGATTCATCAGCCGTG
CAGAGGTAGATGACTCGGTGATTAGGGCGCTTGCTTCTCCCCGCCAGCAAAAACTCAATCAAGGCAGCGTTTACACCGAT
TATGGCGGTCAAATCGAAAAAACCTTACCGAATATTGTCACACGTGCTGCAGGCGACATCGGCATGACCATTGGAGGGAT
CGCCGCATTCCCGGCATTGGACGTCGTGCGCCAGGCACTGCCGATGGTGCTTGCACTACTGAAGATGGCGCTGGTGATCT
GTATCCCTCTGGTGCTCCTGGTCGGCACCTACGACCTGAAGACCGTTGTCACGCTCAGCATCGTGCAATTTGCGCTGTTC
TTTGTGGATTTCTGGTTCCAGCTTGCACGCTGGCTCGACAGTACGATCCTCGATGCGCTTTACGGATGGGGATGGGGCTG
GAATCGGCCGCATAACAATGTTGATCCGCTTGTAGGCATGCACAATACCTTCGGAGACATGTTGCTGAACTTCGTTATGG
GCTCGATGTTCATTGTGCTCCCGGCATTCTGGGTCGGTGCGCTGGCCTGGGCGGGCATTCGGGCGGGGACAATCGCAAAT
AGTTTTTCAGCGGGCACAAAGGATGCTGGTAATGCTGGCGGAAAGGGGGCGGGTACGGTCTCCAAAAAACTCAGGTAG

Protein sequence :
MTLFTTDYLEYYLTLVSWVVHNGIWAVLVSSGVFALPFVAIIIDEWLRSRTEGADEGNKGLLSSMRIENRVWVAIVVVMF
AGIPFIDVDLDTIRYDQARSAQCQISVPQPEDTGWSQSFSTLNNQSAKVPVWWAFMHALSRAITGASVAAIPCGTDLRQM
RMEINATRIDNPLLAQEVADFTHDCYGPARAKLFMSRPDLDEAQMHDVTWIGSTYFVSTGGFYDTYRAKTPREGWAYDSN
RDAGLAQVPSGAGYPSCRQWWSDGSNGLRARLLAQVDPSLLSRIANWAGFISRAEVDDSVIRALASPRQQKLNQGSVYTD
YGGQIEKTLPNIVTRAAGDIGMTIGGIAAFPALDVVRQALPMVLALLKMALVICIPLVLLVGTYDLKTVVTLSIVQFALF
FVDFWFQLARWLDSTILDALYGWGWGWNRPHNNVDPLVGMHNTFGDMLLNFVMGSMFIVLPAFWVGALAWAGIRAGTIAN
SFSAGTKDAGNAGGKGAGTVSKKLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C40 AAN62133.1 hypothetical protein Not tested PAGI-2(C) Protein 0.0 80
ORF SG48 AAN62270.1 hypothetical protein Not tested PAGI-3(SG) Protein 0.0 78
pph92 CAI36133.1 hypothetical protein Not tested PPHGI-1 Protein 1e-150 60
RL014 AAP84141.1 conserved hypothetical protein Not tested PAPI-1 Protein 2e-141 56
EXA17 ABD94626.1 conserved hypothetical protein Not tested ExoU island A Protein 8e-141 55
unnamed ABR13354.1 hypothetical protein Not tested PAGI-5 Protein 2e-141 55
STY4579 NP_458664.1 putative membrane protein Not tested SPI-7 Protein 1e-97 45
t4276 NP_807874.1 hypothetical protein Not tested SPI-7 Protein 1e-97 45
PMI2570 YP_002152289.1 hypothetical protein Not tested Not named Protein 2e-89 42