Gene Information

Name : Pecwa_1597 (Pecwa_1597)
Accession : YP_003258994.1
Strain : Pectobacterium wasabiae WPP163
Genome accession: NC_013421
Putative virulence/resistance : Unknown
Product : integrase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1728416 - 1730224 bp
Length : 1809 bp
Strand : +
Note : PFAM: integrase; KEGG: net:Neut_0006 phage integrase

DNA sequence :
ATGGCACTATCAGACATGGCGGTTCGCCAAGCCAAGGCAACAGGCAAGGCCTATACACTTGGCGACATCGATGGTCTCTC
ATTGGCTGTGACCGACATGGGCGGTCGGTCTTGGCACTTCCGCTATTCTTGGGCTGGCAAGCAGAAACGTATGTCCTTGG
GGACTTACCCTGAGGTCGGTTTGCGCGAAGCGCGGACTCTGCGTGATCAGGCCCGAGCCTTGCTTGCCAAGGGCATCAAT
CCCAAACTTGATCGTAAGCATAAACGGCAGTTCGTACGGCTTGCCGACGAGCACACATTCAAGGCTGTGTTTCTTCAATG
GGTTGAGCATCGTAGGCTAGAGCTCAAGGAAGGGCGCAACAGTACCTTGTCGCAGATCCTGCGTATCTTTGAGCGCGATG
TGCTGCCAAGCCTGAGTAAGCTATCTATTTACGACGTTCGTCGTGCCGACTTGCTGAACGTGCTCTCCAAGATTGAGCAG
CGTGAGGCGTTCACCACTGCAGAGAAAGTACGCTCCTGGCTCAATCAATTGTTTCGCTTTGCGCAGGTGAAAGTCGAAAG
ACTGGAGAGCAATCCGGCATCTGACTTGGATGTGGTAGCTGTTCCTGCTCCGCCTGTTGTTCACAATCCGTTCCTGCGTT
TACCTGAGCTACCCGAACTTCTGCAGAAAGTACGAGGCTATCGTGGAGCGATCACGACGCAACTTGGAATCCGCTTGTTG
TTGCTGACGGGAGTGCGTACAGGCGAGCTACGGTTGGCGGCTCCGGAGCAGTTCGATTTAGAACAGGGGCTGTGGATTAT
TCCTCCGGAAGTGGTCAAGCAACTGCAAACCGATATGCGCAAGAAAGGTAAGCGGCCTCAGGACATTCCCTCCTACATCG
TACCGCTGTCTATTCAGGCGATAGAGATCGTTCGCTACCTGCTCGAAGAGGTGAGGCCAGCGCAACGGTATCTTTTCTCG
CATCGCAGCGATCTGAAAAAGCGTATCAGCGAGAACACGTTGAACGGTGCCCTCAAGCGTATGGGTTATCAGGATTTGCT
CACTGGTCACGGCATCCGTGGCACGATTTCCACGGCACTCAACGAAGTGGGCTACCCCAAAGTTTGGGTGGATGCCCAGC
TTTCGCATTGCGATCCCAACCAGGTGAGCGCAGCTTACAACCATGCACTCTATGTCGAGCCTCGGCGCAAGATGATGCAG
GATTGGGCGGACCGGTTGGACTTGCTGGAGCAGGGAGAAGTAGAAGCCGCCAGTCAGCATCTGACCATTCGCATTGATGG
TGTGCCTGTTCTGGATGAAAGCAATGGGGCAGATGCAATGTCGAAAGATGTGTCACCCATTATCGGTGGTATTACGTCTC
ACCGCTTGTCTGCTGTGCCGGCACGCCCTGTGCCTGAACCTGTCGTTGACATCCCTGTTTCTGACCTGCAGCGTGAGCGG
ATGGAAATGCTCGCAGCTTATGAAGCACCGCACAACTTGCCAGTCGTTCAGTTTTCCAAGCTGGCCGGTAAATCCAAGGA
CCAGATCAATCGAGAAATCAAAGCTGGCAAGTTGTTGACAATCAGTCTTGGGAACCGTGGGCAGAGAGTGCCTGAGTGGC
AACTGGTGCCGATGAAACTCAAACTGACGCAGATGATGATGAAGCATCTTTCGCATGCTGAAGGATGGGATGTATATCGT
TTGTTGAGCAACCCTCATCCTGAGCTGGATGGTTGTGCAGCAGTTGATATTATTAAGCCCACTAATATGAGCAGTGTTGT
GCAGGTTTTGCTGTCATTACAAGCATTCGGAGCTGAGAGAAAAGTGTGA

Protein sequence :
MALSDMAVRQAKATGKAYTLGDIDGLSLAVTDMGGRSWHFRYSWAGKQKRMSLGTYPEVGLREARTLRDQARALLAKGIN
PKLDRKHKRQFVRLADEHTFKAVFLQWVEHRRLELKEGRNSTLSQILRIFERDVLPSLSKLSIYDVRRADLLNVLSKIEQ
REAFTTAEKVRSWLNQLFRFAQVKVERLESNPASDLDVVAVPAPPVVHNPFLRLPELPELLQKVRGYRGAITTQLGIRLL
LLTGVRTGELRLAAPEQFDLEQGLWIIPPEVVKQLQTDMRKKGKRPQDIPSYIVPLSIQAIEIVRYLLEEVRPAQRYLFS
HRSDLKKRISENTLNGALKRMGYQDLLTGHGIRGTISTALNEVGYPKVWVDAQLSHCDPNQVSAAYNHALYVEPRRKMMQ
DWADRLDLLEQGEVEAASQHLTIRIDGVPVLDESNGADAMSKDVSPIIGGITSHRLSAVPARPVPEPVVDIPVSDLQRER
MEMLAAYEAPHNLPVVQFSKLAGKSKDQINREIKAGKLLTISLGNRGQRVPEWQLVPMKLKLTQMMMKHLSHAEGWDVYR
LLSNPHPELDGCAAVDIIKPTNMSSVVQVLLSLQAFGAERKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
int AAN62223.1 putative integrase Not tested PAGI-3(SG) Protein 8e-164 75
int AAN62094.1 putative integrase Not tested PAGI-2(C) Protein 0.0 68
unnamed AFG30104.1 Int Not tested PAGI-2 Protein 0.0 66