|
Name : Pecwa_1531 (Pecwa_1531) Accession : YP_003258935.1 Strain : Pectobacterium wasabiae WPP163 Genome accession: NC_013421 Putative virulence/resistance : Unknown Product : PTS system glucose-like transporter subunit IIB Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG1263 EC number : - Position : 1662716 - 1664257 bp Length : 1542 bp Strand : - Note : TIGRFAM: PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system EIIB/cysteine, phosphorylation site; KEGG: ses:SARI_03958 hypothetical protein DNA sequence : ATGAACAGTCTTTTCTCCGGCGCACAAAAATTGGGTAAATCGTTTATGTTACCCATTGCTGTTTTACCCGCCGCAGGGTT GCTGCTGGGTATTGGCGGCGTCTTTTCCAACCCGATTACCATTGAAACCTACGCTTTCCTCGATAACGCCGTTTTGCAGG CCATTTTCACGTTGATGAAACTGTGCGGCAGCGCCGTGTTTGATAACCTGCCCTTACTGTTTGCCGTCGGGATTGCGGTC GGGATGACCAACACCGACAGAGGAACCGCCGGGCTCGCTTCCGTATTGTCCTTTTTGGTGATGAACAAGGCCATTAACGC CATGTTGGTGATCACACATACGCTGGCGACAGATAATCTCGCCGCGCATGGACAAGCCGTGATTCTTGGTATTACGACAC TTCAGACCGGCGTCCTCGGCGGTATACTTAGCGGCCTGCTCACCGCCTGGTTACACGGCCGCTATAACAAAATCGCACTG CCGGAACTGTTGGCGTTTTTCAGTGGTTCGCGCTTCGTGCCGATTGTGGCGTCATTTGCGGCGCTGTTTCTTGGCGTATT GCTCTTTTACGTTTGGCCCCCGATTCAGAGCGGTATTTCCCATCTGGGTGGGCTGGTAGAAAAGACCGGTTATATCGGCA CGCTGTTCTACGGCATGATCCTTAAATGTCTTATCCCGTTCGGCCTGCACCATATTTTCTATTTACCGTTCTGGCTGACC AGCATCGGCGGAGAGCAAATGGTGAACGGTACGCTGGTACAGGGAACGCAGAAAATCTTCTTTGCGCAGTTGGCCGATCC TAGCGTGACACAATATTACATCGGTGTTTCCCGCTTCATGGCTGGCCGCTTTGCCGACTTTATGTTTGGTTTACCCGGTG CCGCACTGGCGATCTATCACTGTGCCAAGCCCGAAAACCGTGGCAAAGTCGCTGGACTGCTACTTTCCGCCGCACTGACT GCATTCGTTACCGGTATTACCGAACCGCTAGAATTTGCCTTTATGTTCTGCGCACCGCTGCTGTATCTGGTGCATATCGT CTTGACCGGTGTGGCTTTCATGCTGGCGCACGTCCTCGAAATCACTGTCGGGCAAACTTTCTCCGGCGGGCTGATCGACT TCCTGCTGTTCGGCGTCTTGCAGGGTAATGCCAAGACCAACTGGGTGTTGATGCTGCCGCTGGGCGCCGTGATGTTCACC CTTTACTACTGCTCGTTCCGCTTCCTGATTCAGTTACGCCAGTTGAAAACGCCCGGTCGTGAAGATGAATCCACCAGCGA TAACGAAGCGCCAACAATCACGGGAACCGAGCGCGCTCAGGGCATCATTGCCGCACTGGGCGGGAAAGACAACATCATTG ATGTGGACTGCTGCGCGACTCGACTGCGTATTACCGTTAGCGATCCCGCAAAGGTAAAAACCGACGATTTTAAAGCCTTG GGCAGCCGTGGGGCATTTGTTCGCGGACAAGGCGTTCAGGTGGTTTATGGCCCGCATGTCACGCTGATTAAGAATGAAGT TGAAGAATTAATGGCCGTCTAA Protein sequence : MNSLFSGAQKLGKSFMLPIAVLPAAGLLLGIGGVFSNPITIETYAFLDNAVLQAIFTLMKLCGSAVFDNLPLLFAVGIAV GMTNTDRGTAGLASVLSFLVMNKAINAMLVITHTLATDNLAAHGQAVILGITTLQTGVLGGILSGLLTAWLHGRYNKIAL PELLAFFSGSRFVPIVASFAALFLGVLLFYVWPPIQSGISHLGGLVEKTGYIGTLFYGMILKCLIPFGLHHIFYLPFWLT SIGGEQMVNGTLVQGTQKIFFAQLADPSVTQYYIGVSRFMAGRFADFMFGLPGAALAIYHCAKPENRGKVAGLLLSAALT AFVTGITEPLEFAFMFCAPLLYLVHIVLTGVAFMLAHVLEITVGQTFSGGLIDFLLFGVLQGNAKTNWVLMLPLGAVMFT LYYCSFRFLIQLRQLKTPGREDESTSDNEAPTITGTERAQGIIAALGGKDNIIDVDCCATRLRITVSDPAKVKTDDFKAL GSRGAFVRGQGVQVVYGPHVTLIKNEVEELMAV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ef0067 | AAM75272.1 | EF0067 | Not tested | Not named | Protein | 6e-95 | 45 |
| APECO1_2642 | YP_859416.1 | PTS system, glucose-specific IIBC component | Not tested | Not named | Protein | 1e-85 | 45 |
