Gene Information

Name : Pecwa_1417 (Pecwa_1417)
Accession : YP_003258823.1
Strain : Pectobacterium wasabiae WPP163
Genome accession: NC_013421
Putative virulence/resistance : Virulence
Product : general secretion pathway protein I
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 1537700 - 1538065 bp
Length : 366 bp
Strand : +
Note : TIGRFAM: general secretion pathway protein I; PFAM: type II secretion system protein I/J; KEGG: pct:PC1_2855 general secretion pathway protein I

DNA sequence :
ATGAGACGGCAGAAAGGGATGACGCTGGTGGAAGTGTTGGTTGCGCTGAGCGTTTTTGCTCTGGCGGGCATTGCCGTTTT
GCAAACGACAGCCAGACAAGCAAGCAGCCTGAGCCGACTGGAAGAGAAAACATTTGCTGGCTGGGTGGCTGAAAACCAGC
AGGTTCAACTGCGACTGGAACAGCGCTGGCCGGAAGCGTCGTGGGTGAAAGGGGAAACGAAATTCGCTGGCGTGCGTTGG
CATTGGCGCTGGCAGGGCATAGAAACTGGCGACCCCCAGACTAAAGCGCTGGATGTGGAAGTGCGGCGTAATAAAGATGC
CTTTGCCGCCGATGCTTCGCTACGCACCTATGTGGTGAAGCCATAA

Protein sequence :
MRRQKGMTLVEVLVALSVFALAGIAVLQTTARQASSLSRLEEKTFAGWVAENQQVQLRLEQRWPEASWVKGETKFAGVRW
HWRWQGIETGDPQTKALDVEVRRNKDAFAADASLRTYVVKP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspI CAE85229.1 GspI, hypothetical type II secretion protein Not tested PAI V 536 Protein 4e-09 48
gspI YP_854402.1 type II secretion protein GspI Not tested PAI I APEC-O1 Protein 4e-07 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pecwa_1417 YP_003258823.1 general secretion pathway protein I VFG2052 Protein 5e-10 47
Pecwa_1417 YP_003258823.1 general secretion pathway protein I VFG0178 Protein 7e-17 46