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Name : Pecwa_1414 (Pecwa_1414) Accession : YP_003258820.1 Strain : Pectobacterium wasabiae WPP163 Genome accession: NC_013421 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 1535338 - 1536564 bp Length : 1227 bp Strand : + Note : TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system F domain; KEGG: eca:ECA3107 general secretion pathway protein F DNA sequence : ATGGCACAGTACCAATATCAAGCGCTGGATGCGCAGGGGAAAAAATGCCGTGGCAGTCAGGAGGCGGACTCCGCCAGACA GGCGCGCCAGCTATTGCGGGAACGTGGACTGGTGCCGTTGTCGGTTGATGAAAGCCGAGGCGACCAGCAGAAAACCCGTT CTACGGGATTCTCCCTACGCCGAAAAATTCGTATTAGTACCTCAGATTTAGCGCTGTTGACGCGCCAGTTAGCCACGCTG GTGGCGGCATCGCTGCCGCTGGAAGAAGCGCTGGATGCGGTGGCGAAGCAGAGTGAAAAGCCGCATCTGAGCCAGTTGAT GGCGGCGGTACGCAGCAAGGTGATGGAAGGCCACTCGTTGGCCGATGCCATGAAGTGTTTTCCCAGTAGCTTTGAACGGC TGTATTGCGCAATGGTCGCAGCAGGCGAGACGTCCGGTCACCTTGATGCCGTGTTGAATCGGCTGGCGGACTACACCGAG CAGCGACAACAGATGCGTAGCCGCATACAGCAGGCAATGATCTACCCCTGTGTGTTAACCGTGGTCGCGATTGCGGTGGT CAGTATTTTGCTGTCCGTCGTGGTGCCGAAGGTCGTCGAGCAATTTATTCACATGAAGCAGGCGTTGCCACTTTCTACCC GAGTTTTGATGGGGATGAGCGATGCCGTGCGCACGTTTGGGCCGTGGTTTCTATTGGCATTACTGGCTGGATTTATGGCG CTGCGGGTGATGCTGCGGCAGGAAAAGCGGCGCGTTAATTTTCATCGACGCCTGCTGCATTTACCGTTGCTTGGGCGTAT CGCTCGCGGCTTGAATACGGCACGCTACGCGCGGACGCTCAGCATTCTCAACGCCAGTGCCGTGCCGCTGTTACAGGCGA TGCGCATTAGTGGTGATGTAATGAGCAATGATTACGCCCGCCATCGGCTCTCGATGGCAACGGATGCGGTGCGAGAGGGC GTCAGTCTGCACAAGGCGCTGGAACAGACGGCGCTCTTTCCCCCGATGATGCGCCATATGATTGCCAGCGGTGAGCGCAG CGGCGAGTTGGACAGCATGCTGGAACGGGCAGCGGATAATCAGGATCGTGAATTCAGTTCGCAGATGACGCTGGCGCTGG GGTTATTTGAACCTCTGCTGGTGGTCAGCATGGCGGCAGTGGTGTTGTTTATCGTATTGGCGATTTTACAACCGATTCTG CAACTGAATACGTTAATGAGTTCGTAA Protein sequence : MAQYQYQALDAQGKKCRGSQEADSARQARQLLRERGLVPLSVDESRGDQQKTRSTGFSLRRKIRISTSDLALLTRQLATL VAASLPLEEALDAVAKQSEKPHLSQLMAAVRSKVMEGHSLADAMKCFPSSFERLYCAMVAAGETSGHLDAVLNRLADYTE QRQQMRSRIQQAMIYPCVLTVVAIAVVSILLSVVVPKVVEQFIHMKQALPLSTRVLMGMSDAVRTFGPWFLLALLAGFMA LRVMLRQEKRRVNFHRRLLHLPLLGRIARGLNTARYARTLSILNASAVPLLQAMRISGDVMSNDYARHRLSMATDAVREG VSLHKALEQTALFPPMMRHMIASGERSGELDSMLERAADNQDREFSSQMTLALGLFEPLLVVSMAAVVLFIVLAILQPIL QLNTLMSS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 3e-84 | 55 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 7e-84 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Pecwa_1414 | YP_003258820.1 | general secretion pathway protein F | VFG2049 | Protein | 1e-81 | 54 |
| Pecwa_1414 | YP_003258820.1 | general secretion pathway protein F | VFG0181 | Protein | 1e-80 | 52 |
| Pecwa_1414 | YP_003258820.1 | general secretion pathway protein F | VFG1870 | Protein | 3e-65 | 43 |
