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Name : Pecwa_1413 (Pecwa_1413) Accession : YP_003258819.1 Strain : Pectobacterium wasabiae WPP163 Genome accession: NC_013421 Putative virulence/resistance : Virulence Product : general secretory pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 1533840 - 1535336 bp Length : 1497 bp Strand : + Note : KEGG: eca:ECA3108 general secretion pathway protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: ATPase AAA DNA sequence : ATGAGCGACGTTGCCTCTTCGATTATAGAATTACGTCCCATATTGCCTTTCGCATATGCGCGATCGCAGCAAATTCTGCT GTTGCAGGGGGATAATGATGCAAGCCTTCAGACGATCTGTGTTGCGCAGACGTCAGCGGCAGCGCTGTTGGAGGCGCGTC GGGTTGCAGGTTGCCCGCTAAGGATTGAGCGGGTGACGGAAGACGAGTTTGAACGACAGTTAGTCATTAGCTATCAGCGC GATTCGGAAGAAGCGCGCCGTCTGATGGAGGACATCGGTAATGAGATGGACTTCTATACGTTGGTGGAAGAACTGCCAGA CAGTGATGATTTACTCGATGCCGATGATGATGCGCCGATTATCCGCCTCATCAATGCCATGTTAACCGAAGCGATTAAGA ATAAGGCGTCGGATATTCATATCGAAACCTATGAGCGTTATTTGCTGATCCGTTTCCGGGTTGACGGCGTATTGCGTGAG ATTTTGCGTCCACAGCGTAAGCTGGCTTCGCTGCTGGTGTCGCGTATCAAAGTCATGGCAAAGCTGGATATTGCGGAAAA GCGTATCCCGCAGGATGGGCGCATGGCGCTGAGGGTGGGAGGACGGGCGGTTGACGTGCGTGTCTCCACTCTCCCGTCGA ATTACGGTGAGCGTGTCGTGCTGCGTTTGCTGGATAAAAACAGCGTTAAGCTCGATCTTGAATTGCTGGGTATGTCGGAA CGCAATCGACAACTGCTGGACAGCCTGATCCATCGCCCACACGGTATTATTCTCGTCACCGGCCCGACGGGGTCGGGGAA AAGTACCACGCTTTATGCCGCGCTTAGCCGCCTGAATGCTTCGGAACGTAACATCATGACGGTGGAAGATCCCATCGAAT ATGAGCTGGAAGGCATCGGGCAAACGCAGGTCAATACCAAAGTGGACATGACGTTTGCCCGTGGGCTGCGTGCCATTTTG CGTCAGGATCCGGACGTGGTGCTGGTAGGGGAGGTTCGCGATGGTGAAACCGCGCAGATTGCCGTGCAGGCATCGCTGAC TGGCCACCTTGTACTCTCCACATTGCATACCAATAGTGCGCTGGGCGCGCTGTCTCGTTTGCAGGATATGGGTGTAGAAC CTTTCCTGCTATCAACCTCTTTGTTGGGCGTACTCGCACAGCGTCTGGTTAGAACGTTATGTTCTGACTGTAGTCAGCCG CAGCCTGTCGATCCGGTTCAGGCGAAACAGATGGGGATCGCGCCGGATACGCTGCTGCACAACCCCGTTGGCTGCCCGCA GTGTAGCTTCACCGGCTACCGCGGACGTATCGGCATTCATGAGCTGGTGTTGATCAATGACGATGTCCGCACGGCGATCC ACCGTAGTGAGGGGGAAATGGCGATTGCGCAGATTTTGGGGGAGAGCCGAACGACAATCCGTCAGGACGGGTTGGAGAAG GTACTGGCGGGGCTCACAACCTGGGAAGAAGTGATCCGCGTAACCAAAGAGGAATGA Protein sequence : MSDVASSIIELRPILPFAYARSQQILLLQGDNDASLQTICVAQTSAAALLEARRVAGCPLRIERVTEDEFERQLVISYQR DSEEARRLMEDIGNEMDFYTLVEELPDSDDLLDADDDAPIIRLINAMLTEAIKNKASDIHIETYERYLLIRFRVDGVLRE ILRPQRKLASLLVSRIKVMAKLDIAEKRIPQDGRMALRVGGRAVDVRVSTLPSNYGERVVLRLLDKNSVKLDLELLGMSE RNRQLLDSLIHRPHGIILVTGPTGSGKSTTLYAALSRLNASERNIMTVEDPIEYELEGIGQTQVNTKVDMTFARGLRAIL RQDPDVVLVGEVRDGETAQIAVQASLTGHLVLSTLHTNSALGALSRLQDMGVEPFLLSTSLLGVLAQRLVRTLCSDCSQP QPVDPVQAKQMGIAPDTLLHNPVGCPQCSFTGYRGRIGIHELVLINDDVRTAIHRSEGEMAIAQILGESRTTIRQDGLEK VLAGLTTWEEVIRVTKEE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-135 | 63 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-135 | 63 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Pecwa_1413 | YP_003258819.1 | general secretory pathway protein E | VFG2048 | Protein | 5e-136 | 63 |
| Pecwa_1413 | YP_003258819.1 | general secretory pathway protein E | VFG0182 | Protein | 1e-134 | 62 |
| Pecwa_1413 | YP_003258819.1 | general secretory pathway protein E | VFG1876 | Protein | 2e-123 | 56 |
| Pecwa_1413 | YP_003258819.1 | general secretory pathway protein E | VFG2426 | Protein | 6e-73 | 46 |
