Gene Information

Name : Pecwa_1393 (Pecwa_1393)
Accession : YP_003258800.1
Strain : Pectobacterium wasabiae WPP163
Genome accession: NC_013421
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1510898 - 1511509 bp
Length : 612 bp
Strand : +
Note : KEGG: ypi:YpsIP31758_0768 hypothetical protein

DNA sequence : 
ATGATAGATCACATTCGTATCGATCAGAGCCATGCTCCGTTTAACGAGACTTATCTGCAACGCATGATTAACGTGATAAA
TAACGCAGTAGCCGAGCATCCGCGCACCATGGCAATACGGGTAGATTTACGCCTGCCAGACGATGAATGCAATGCACGTC
AGGGCTTGATGTCCCGTTTCATTGAATCACTGGATGCAAAGATTGAAGCGCGATATCGAAGTAAGCAGAAACAAGGGAAA
CGAACCTATCCCAGCCACCTGCGTCATCTCTGGGTACGCGAAGTTGGAGAGGAAAATCAGAAGTCGCATTATCATGTAGT
CTTGCTTGTTAACAACGATACCTTCAGCGGCCTGGGAATGTATGACGAAAGCGGGGCGGGGTTAGCGTCGTTGATACAGG
CCGCATGGCTGAGTGGGTTAGGTCTTAATAACCAACCCGGCTACCGGACGCTGGTACACTTCCCTAAAAACCCTCTCTAT
TATCTGAATATAAACGCTGAAGATTATCGAACGATTTATGATCGACTGACGTTCAGGGTTAGCTACTTCGCCAAAGAGCG
AACCAAATCGTATTGCAGGGAAGAACGGTCGTTTGGGTGCAGTCAGCGTTGA

Protein sequence : 
MIDHIRIDQSHAPFNETYLQRMINVINNAVAEHPRTMAIRVDLRLPDDECNARQGLMSRFIESLDAKIEARYRSKQKQGK
RTYPSHLRHLWVREVGEENQKSHYHVVLLVNNDTFSGLGMYDESGAGLASLIQAAWLSGLGLNNQPGYRTLVHFPKNPLY
YLNINAEDYRTIYDRLTFRVSYFAKERTKSYCREERSFGCSQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAI43834.1 hypothetical protein Not tested LEE Protein 4e-29 43
unnamed AAL08464.2 unknown Not tested SRL Protein 2e-30 42
unnamed AAW51744.1 Aec61 Not tested AGI-3 Protein 5e-28 42
unnamed ADD91714.1 hypothetical protein Not tested PAI-I AL862 Protein 2e-28 42
APECO1_1084 YP_853104.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 5e-30 42
ECO103_3573 YP_003223434.1 hypothetical protein Not tested LEE Protein 1e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pecwa_1393 YP_003258800.1 hypothetical protein VFG1055 Protein 9e-31 42