Gene Information

Name : Pecwa_1387 (Pecwa_1387)
Accession : YP_003258794.1
Strain : Pectobacterium wasabiae WPP163
Genome accession: NC_013421
Putative virulence/resistance : Virulence
Product : DeoR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG2378
EC number : -
Position : 1505927 - 1506625 bp
Length : 699 bp
Strand : -
Note : PFAM: regulatory protein DeoR; KEGG: pct:PC1_2884 regulatory protein DeoR

DNA sequence : 
ATGACACAGGCTGACCGCCGATATGACCGGCTGGCCGTCAGGCTGTCATTGATAATCAGCCGATTACTGGCGGGAGAAAC
GCTGAGCGTCAGAAAACTGGCAGCAGAGTTTGGCGTTTCTGCCCGTACCTTGCGGCGAGACTTTCGTGAACGGCTGATGT
ATCTCGACCTGGAATACCGTAACGGCCTTTGCCGTTTGCCGGAGCACCACAACCCGGCACGGCATGGGCAGGATGTGCTG
ATGTTTGTCCGACAGACCGGGATGGAGAACGTGTTTCCCGGTCTGGATAACCGGTTGGTTAACACCCTGTTGGACAGCGG
TGAGGACGCACCCTGTCTGGTCTGGCATCCTCCCCAGCGCGGTACGCCGACACTGCCGGGGCATTTTTACCGTCTGACTC
GGGCAATTGGCGAGCAGCTACGAGTCACCGTTCTGGCCGACGGCCAGCGCTATGACGGGTTATCGCCTTATCGGCTTATC
TGCCTGTATGGCGAGTGGTATCTGGTGGCCGAATCGCTAGGGCATCTTCTGGTCCTGCCACTGCATGAGATTCACGGCGT
GACGGTGTCCACCGAGTCATTCCAGCGCCGCGATGATATCTGCCATCTGACCACACAATCCGGCTTCATCACGGCATTGC
CGCATTTTCGCTTTATTCACGACGTACTCACCACCTTCGGCACGTCTCCGACCACATAA

Protein sequence : 
MTQADRRYDRLAVRLSLIISRLLAGETLSVRKLAAEFGVSARTLRRDFRERLMYLDLEYRNGLCRLPEHHNPARHGQDVL
MFVRQTGMENVFPGLDNRLVNTLLDSGEDAPCLVWHPPQRGTPTLPGHFYRLTRAIGEQLRVTVLADGQRYDGLSPYRLI
CLYGEWYLVAESLGHLLVLPLHEIHGVTVSTESFQRRDDICHLTTQSGFITALPHFRFIHDVLTTFGTSPTT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yfjR AAZ04453.1 transcriptional regulator Not tested PAI I APEC-O1 Protein 6e-48 45
c5160 NP_757008.1 transcriptional regulator YfjR Not tested PAI II CFT073 Protein 2e-47 45
APECO1_3492 YP_854319.1 transcriptional regulator Not tested PAI I APEC-O1 Protein 8e-48 45
unnamed CAD33782.1 hypothetical protein Not tested PAI I 536 Protein 3e-47 45
unnamed CAD42094.1 hypothetical protein Not tested PAI II 536 Protein 1e-47 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pecwa_1387 YP_003258794.1 DeoR family transcriptional regulator VFG1613 Protein 6e-48 45
Pecwa_1387 YP_003258794.1 DeoR family transcriptional regulator VFG1523 Protein 2e-47 45