Gene Information

Name : Pecwa_1380 (Pecwa_1380)
Accession : YP_003258787.1
Strain : Pectobacterium wasabiae WPP163
Genome accession: NC_013421
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1502142 - 1502975 bp
Length : 834 bp
Strand : -
Note : KEGG: eca:ECA2852 hypothetical protein

DNA sequence :
ATGCAAATTGAACCCGAGGTTTTGACCGAACACACCGAGCTGATTTGCTCGACCAATATCGAACGTATCGTTACCGGACG
TGATACCGCGCTGCAACAGATAGAACAGCTCCTCAACCAGCTACAGGTTATTTCAACACTCACAGCGACTATTGGTGGCG
GCACCGCTGAAGACTGGGCGCTAAAGCAGGGGCATCGCTACGACTGCTGGCTAACAGAAGCACCCAACAAGGCGATGCCC
GCCATCACCCGCACGTTGGATCGCAATATCTGGCGCGACCTGATGCTGAAGTCCGGCATGTTGTCGCTGATGGATGCCGA
AGCGCGTAGCCAGTGGCATAAACATCTGGATGAAGGTGAGCTACCAGCCATCAGTGAAACCAATATCCTCAGTACATTTG
AGCAACTTCACCAGAGTAAGCTGGAGGTATTCGAGCGCGGGATAATCAATGTATTCAAAGGGCTATCGTGGGATTACAAA
ACTAATCACCCTTGTTACTTCGGCAAGAAAATCATCATCAGCAATCTGGTGACCTACAACCGTTGGGGCTTTGGCCTGAA
CTGGGGTTGGCGACGCGATCAACTGGCTGATCTGGAACGTATGCTGTATCTGCTGGATGGTAAACCTATTCCTGATAATC
GGGGGGATCTTACCATCCGACTGATGGACCACATCCGCGATAATCCCCATCAGCAGGAATACGAAGATGAGTTCTTTAGT
GTGCGTTACTTTCAGAAAGGTACCGGGCATCTCACCTTTAAACGCCCTGACTTGATCGATCAGATGAACGATATTATCGC
CAAACATTATCCGGGGATGTTGGCGGCCAGGTAA

Protein sequence :
MQIEPEVLTEHTELICSTNIERIVTGRDTALQQIEQLLNQLQVISTLTATIGGGTAEDWALKQGHRYDCWLTEAPNKAMP
AITRTLDRNIWRDLMLKSGMLSLMDAEARSQWHKHLDEGELPAISETNILSTFEQLHQSKLEVFERGIINVFKGLSWDYK
TNHPCYFGKKIIISNLVTYNRWGFGLNWGWRRDQLADLERMLYLLDGKPIPDNRGDLTIRLMDHIRDNPHQQEYEDEFFS
VRYFQKGTGHLTFKRPDLIDQMNDIIAKHYPGMLAAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF_49 AAZ04463.1 hypothetical protein Not tested PAI I APEC-O1 Protein 5e-78 63
APECO1_3484 YP_854327.1 hypothetical protein Not tested PAI I APEC-O1 Protein 7e-78 63
z1226 CAD33792.1 Z1226 protein Not tested PAI I 536 Protein 4e-78 63
aec79 AAW51762.1 Aec79 Not tested AGI-3 Protein 1e-78 62
Z1226 NP_286760.1 hypothetical protein Not tested TAI Protein 1e-79 62
Z1664 NP_287166.1 hypothetical protein Not tested TAI Protein 1e-79 62
unnamed AAL57572.1 unknown Not tested LEE Protein 5e-78 62
unnamed CAI43906.1 hypothetical protein Not tested LEE Protein 5e-78 62
unnamed CAE85207.1 hypothetical protein Not tested PAI V 536 Protein 2e-77 61
SF3002 NP_708776.1 hypothetical protein Not tested SHI-1 Protein 2e-75 60
ECO111_3781 YP_003236116.1 hypothetical protein Not tested LEE Protein 4e-76 60
unnamed AAK00485.1 unknown Not tested SHI-1 Protein 2e-75 60
S3207 NP_838489.1 hypothetical protein Not tested SHI-1 Protein 2e-75 60
ECO103_3595 YP_003223452.1 hypothetical protein Not tested LEE Protein 6e-75 59
unnamed CAD66210.1 hypothetical protein Not tested PAI III 536 Protein 1e-68 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pecwa_1380 YP_003258787.1 hypothetical protein VFG1533 Protein 2e-78 63
Pecwa_1380 YP_003258787.1 hypothetical protein VFG0666 Protein 1e-75 60
Pecwa_1380 YP_003258787.1 hypothetical protein VFG1685 Protein 6e-69 58