Gene Information

Name : Pecwa_1349 (Pecwa_1349)
Accession : YP_003258761.1
Strain : Pectobacterium wasabiae WPP163
Genome accession: NC_013421
Putative virulence/resistance : Virulence
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : 1.1.1.22
Position : 1474199 - 1475365 bp
Length : 1167 bp
Strand : +
Note : KEGG: pct:PC1_2929 nucleotide sugar dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase

DNA sequence : 
ATGAAAATAGCCATTAGCGGAACGGGATATGTGGGTTTATCGAATGGATTATTATTAGCACAACGGCATCAGGTTGTGGC
GTTGGATATTGTGGCTGAAAAAGTGGCGCTGTTAAATCAACGAAAATCGCCGATTAATGACGCAGAAATTGAGCGTTTTT
TACAACATGAAACGCTAGATTTCTCGGCTACGCTGGATAAGTATGAGGCGTATATCGATGCGCAGTTCGTGATTATCGCT
ACGCCGACGGATTACGATCCGCAAACCAACTATTTCAATACCTCGTCGGTAGAGGCGGTCATTCGCGATGTGTTGGCGAT
TAACCCACAGGCCATTATGGTGATTAAATCGACGGTGCCTGTTGGCTTTACGGAGAAAATCAGCCAACAGTTGGATACGG
ATCACATCATTTTTTCGCCCGAGTTTTTACGCGAAGGAAAGGCGCTGCATGACAATCTTTACCCGTCACGAATTGTGGTG
GGTGAACGCTCGGAAAGGGCAAGGTTCTTCGCTAACCTATTGATAGAATGCGCATTAAAGAAAGATGTTCGTGTACTATT
TACCGATCCGACAGAGGCCGAAGCGATAAAGTTATTTGCGAATACCTTTCTGGCAATGCGGGTGGCCTACTTTAATGAAT
TGGACAGTTATGCCGAGTCGCTAGGGTTGAATACCCGGCAGATTATCGAAGGCGTGTGTCTCGATCCTCGCATCGGCGAT
TACTACAACAACCCTTCTTTTGGCTACGGCGGTTACTGTTTACCGAAAGATACCCGGCAGCTTCTGGCTAACTATCGTAC
CGTACCGAATAATCTGATCAAGGCTATCGTAGAGGCTAACCATACGCGGAAAGACTTCATTGCCGACACAATTATCCGTC
GCCACCCTAAAACCGTTGGCGTCTATCGCCTTATCATGAAAGCGGGGTCGGACAATTTTCGCTTTTCCTCCATTCAGGGC
ATTATGAAAAGGATAAAAGCGAAAGGAATCAATGTTGTGATTTATGAACCGGGCATTGATGATGACGATTTTCTGGATTT
TCCTATCATTCATCAATTCGACAGTTTCAAACAACAGTGTGACATTATTATTACCAATCGTTATGTCGATGAATTAAAAG
ATGTGATGGGGAAAGTCTATACGCGAGATTTATTTGGCGAAGATTGA

Protein sequence : 
MKIAISGTGYVGLSNGLLLAQRHQVVALDIVAEKVALLNQRKSPINDAEIERFLQHETLDFSATLDKYEAYIDAQFVIIA
TPTDYDPQTNYFNTSSVEAVIRDVLAINPQAIMVIKSTVPVGFTEKISQQLDTDHIIFSPEFLREGKALHDNLYPSRIVV
GERSERARFFANLLIECALKKDVRVLFTDPTEAEAIKLFANTFLAMRVAYFNELDSYAESLGLNTRQIIEGVCLDPRIGD
YYNNPSFGYGGYCLPKDTRQLLANYRTVPNNLIKAIVEANHTRKDFIADTIIRRHPKTVGVYRLIMKAGSDNFRFSSIQG
IMKRIKAKGINVVIYEPGIDDDDFLDFPIIHQFDSFKQQCDIIITNRYVDELKDVMGKVYTRDLFGED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 3e-89 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pecwa_1349 YP_003258761.1 nucleotide sugar dehydrogenase VFG0963 Protein 6e-95 54