|
Name : Pecwa_1239 (Pecwa_1239) Accession : YP_003258660.1 Strain : Pectobacterium wasabiae WPP163 Genome accession: NC_013421 Putative virulence/resistance : Unknown Product : transporter permease Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0609 EC number : - Position : 1354392 - 1355474 bp Length : 1083 bp Strand : - Note : PFAM: transporter permease; KEGG: pct:PC1_3036 transporter permease DNA sequence : ATGAGTACAACCACTGAACCGGGTATCCGTAATACTGCCACGGATGCCAACACCATTATGGACAACTATCGCGGTATTAT TCGACGCCGTGTGGGTGTTATGGCGATACTGCTGTTGATCATCATCGGCTCGTTGTTGCTGGATTTCACGATGGGGCCTT CGGGGCTAACGCTTGATGTGCTCTGGAACACGCTGACCGATCCAGCCAGCGCCGATGCAGGCACACGCGTGATCGTCTGG GATATTCGTCTGCCCTATGCGCTGATGGCTATCATCGTCGGGCTAGCGCTCGGCCTGGCTGGCGCAGAAATGCAGACGAT CCTGAACAACCCGTTGGCCAGCCCGTTTACGCTTGGCGTTTCCTCCGCCGCCGCATTCGGCGCGGCGTTGGCTATCGTGC TAGGCATCGGTATCCCCGGCATTCCGGCTCAGTGGTTTATTTCTGCAAACGCCTTTATCTTTGCTCTGCTGGCAGCGTTG CTGCTTGATGGCATTACGCGCTGGACGCAGGTCGCCACCTCCGGCGTGGTGCTGTTCGGTATCGCGTTGGTGTTCACTTT CAATGCGCTGGTTTCCATGCTCCAGTTCATCGCTAACGAAGACACGTTGCAAGGTCTAGTGTTCTGGACCATGGGCAGTC TGGCTCGCGCCTCGTGGGAAAAGCTGGGCATCCTGCTGCTGGTACTGGTCATCGTTATGCCCATTTCGTTAATGAGTTCG TGGAAATTGACTGCACTGAGGTTGGGTGAAGATCGTGCCGTCAGCTTCGGTATTAACGTGCGCCGCTTGCGTCTGGCAAC GCTGCTGCGTATTAGTATTTTATCCGCTATTTCAGTCGCGTTTGTTGGCCCCATCGGCTTTATCGGTCTGGTTGCTCCGC ATATCGCACGTATGATTTTCGGTGAAGATCACCGTTTCTATTTGCCTGCCAGTGCATTAACGGGTGCGCTGGTGCTATCG ATGGCGTCTGTTGCCTCGAAAAACCTGATTCCCGGCGTCATTATTCCGGTCGGTATCGTCACCTCACTGGTTGGCGTACC TTTCTTCCTGAGTATTATTTTGCGCCACAGAGGGAACGTATGA Protein sequence : MSTTTEPGIRNTATDANTIMDNYRGIIRRRVGVMAILLLIIIGSLLLDFTMGPSGLTLDVLWNTLTDPASADAGTRVIVW DIRLPYALMAIIVGLALGLAGAEMQTILNNPLASPFTLGVSSAAAFGAALAIVLGIGIPGIPAQWFISANAFIFALLAAL LLDGITRWTQVATSGVVLFGIALVFTFNALVSMLQFIANEDTLQGLVFWTMGSLARASWEKLGILLLVLVIVMPISLMSS WKLTALRLGEDRAVSFGINVRRLRLATLLRISILSAISVAFVGPIGFIGLVAPHIARMIFGEDHRFYLPASALTGALVLS MASVASKNLIPGVIIPVGIVTSLVGVPFFLSIILRHRGNV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL67369.1 | putative permease | Not tested | PAI II CFT073 | Protein | 3e-79 | 75 |
| irp6B | NP_938505.1 | membrane protein permease Irp6B | Not tested | Not named | Protein | 4e-48 | 44 |
